RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CHMP24386 653 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 RPL3P39023 403 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 CLDN18P56856 261 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 DUSP5Q16690 384 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 GRAMD1BQ3KR37 738 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 VPS26BQ4G0F5 336 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 EXOSC6Q5RKV6 272 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 AAGABQ6PD74 315 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 COQ8BQ96D53 544 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 FAM120BQ96EK7 910 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 OTUB1Q96FW1 271 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 PRPF18Q99633 342 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 YIPF4Q9BSR8 244 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 CCDC28BQ9BUN5 200 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 KCNN3Q9UGI6 736 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 ADAM21Q9UKJ8 722 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 ANKHD1Q8IWZ3 2542 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 CLCA1A8K7I4 914 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 SDHDO14521 159 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 G6PDP11413 515 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ZNF708P17019 499 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 HK1P19367 917 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 CLK3P49761 638 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 IDH3AP50213 366 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 PRR5P85299 388 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 CPTPQ5TA50 214 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ARSKQ6UWY0 536 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ZAR1Q86SH2 424 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 RIMKLAQ8IXN7 391 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 OR4C3Q8NH37 302 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 FAM110BQ8TC76 370 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 DTNBP1Q96EV8 351 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 UCN2Q96RP3 112 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ZBTB18Q99592 522 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ZNF559Q9BR84 538 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 TBL1XR1Q9BZK7 514 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ZCCHC3Q9NUD5 404 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 MRGBPQ9NV56 204 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 FBXO34Q9NWN3 711 aa16.25■□□□□ 0.19
SCAMP4-213ENST00000621748 ANKRD17O75179 2603 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 UBDO15205 165 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 KCNK2O95069 426 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 ANGPTL1O95841 491 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 HMGN2P05204 90 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 ALOX5P09917 674 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 CTSSP25774 331 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 UQCRC1P31930 480 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 ASCL1P50553 236 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 DGKQP52824 942 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 SEC24CP53992 1094 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 DIO3P55073 304 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 IRX1P78414 480 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 FOXF2Q12947 444 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 FBXL19-AS1Q494R0 122 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 SLC9B1Q4ZJI4 515 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 ZCCHC12Q6PEW1 402 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 FIGNL1Q6PIW4 674 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 OR5M1Q8NGP8 315 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 OR5P2Q8WZ92 322 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 C1GALT1C1Q96EU7 318 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 ZNF317Q96PQ6 595 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 CXorf36Q9H7Y0 433 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 KLHL14Q9P2G3 628 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 SNX8Q9Y5X2 465 aa16.24■□□□□ 0.19
SCAMP4-213ENST00000621748 AKAP6Q13023 2319 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 IGLV3-32A0A0A0MS00 114 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 GMFGO60234 142 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 OXSR1O95747 527 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 C6orf47O95873 294 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 TMIGD3P0DMS9 266 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 IDO1P14902 403 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 NCF2P19878 526 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 CAPN3P20807 821 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 PRPS1L1P21108 318 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 PRIM2P49643 509 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 CLDN15P56746 228 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 C17orf67Q0P5P2 114 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 MYBPHQ13203 477 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 LASP1Q14847 261 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 GSTA3Q16772 222 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 CCNJQ5T5M9 372 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 RAET1LQ5VY80 246 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 SPATA21Q7Z572 469 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 RFWD2Q8NHY2 731 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 PSMA8Q8TAA3 256 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 JADE3Q92613 823 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 RNASE6Q93091 150 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 WNT2BQ93097 391 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 ELAC2Q9BQ52 826 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 TMEM120AQ9BXJ8 343 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 DPY30Q9C005 99 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 PTGES2Q9H7Z7 377 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 SLC24A3Q9HC58 644 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 ATAD3AQ9NVI7 634 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 CLCF1Q9UBD9 225 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 ZNF337Q9Y3M9 751 aa16.23■□□□□ 0.19
SCAMP4-213ENST00000621748 OR2M5A3KFT3 312 aa16.22■□□□□ 0.19
SCAMP4-213ENST00000621748 ALG1L2C9J202 215 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms