RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MAPK14Q16539 360 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 COQ5Q5HYK3 327 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 REP15Q6BDI9 236 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 GFRALQ6UXV0 394 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 POU5F2Q8N7G0 328 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 GATSQ8NAP1 163 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 DUSP19Q8WTR2 217 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 SLC38A5Q8WUX1 472 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 ANKRD27Q96NW4 1050 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 CGREF1Q99674 301 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 SLC39A3Q9BRY0 314 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 TBL1XR1Q9BZK7 514 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 QRSL1Q9H0R6 528 aaKnown RBP13.03□□□□□ -0.32
CBWD3-217ENST00000621474 ACKR4Q9NPB9 350 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 QPCTLQ9NXS2 382 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 TENM4Q6N022 2769 aa13.03□□□□□ -0.32
CBWD3-217ENST00000621474 A0A1B0GTH9 108 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 A0A1B0GVC2 190 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 BBIP1A8MTZ0 92 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 CDC40O60508 579 aaKnown RBP eCLIP13.02□□□□□ -0.32
CBWD3-217ENST00000621474 FAM107AO95990 144 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 HPNP05981 417 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 DSTNP60981 165 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 CAPRIN1Q14444 709 aaKnown RBP13.02□□□□□ -0.32
CBWD3-217ENST00000621474 ZNF141Q15928 474 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 EIF2S3LQ2VIR3 472 aaKnown RBP13.02□□□□□ -0.32
CBWD3-217ENST00000621474 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 ATAD3BQ5T9A4 648 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 TRILQ7L0X0 811 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 GHDCQ8N2G8 530 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 OR2M3Q8NG83 312 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 MAL2Q969L2 176 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 TRNT1Q96Q11 434 aaKnown RBP13.02□□□□□ -0.32
CBWD3-217ENST00000621474 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 MED11Q9P086 117 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 LIPT1Q9Y234 373 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 ZNF835Q9Y2P0 537 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 WDR45Q9Y484 360 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 DSPPQ9NZW4 1301 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 COL12A1Q99715 3063 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 MYO7BQ6PIF6 2116 aa13.02□□□□□ -0.32
CBWD3-217ENST00000621474 SCDO00767 359 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 OIP5O43482 229 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 NDUFB5O43674 189 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 CBR3O75828 277 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 MTPNP58546 118 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 C17orf67Q0P5P2 114 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 NFYCQ13952 458 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 CYLC2Q14093 348 aaPredicted RBP13.02□□□□□ -0.33
CBWD3-217ENST00000621474 SLC10A1Q14973 349 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 MAPRE2Q15555 327 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 ADRM1Q16186 407 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 TRMT5Q32P41 509 aaKnown RBP13.02□□□□□ -0.33
CBWD3-217ENST00000621474 GPAT3Q53EU6 434 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 EIPR1Q53HC9 387 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 CBLN3Q6UW01 205 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 ATCAYQ86WG3 371 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 ZNF619Q8N2I2 560 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.33
CBWD3-217ENST00000621474 RP9Q8TA86 221 aaKnown RBP13.02□□□□□ -0.33
CBWD3-217ENST00000621474 DSN1Q9H410 356 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 POLE3Q9NRF9 147 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 SPRR3Q9UBC9 169 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 P2RX2Q9UBL9 471 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 TNFRSF10DQ9UBN6 386 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 ARL2BPQ9Y2Y0 163 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 DTNAQ9Y4J8 743 aa13.02□□□□□ -0.33
CBWD3-217ENST00000621474 DIDO1Q9BTC0 2240 aaKnown RBP13.02□□□□□ -0.33
CBWD3-217ENST00000621474 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 MRASO14807 208 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 SUSD5O60279 629 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 ZIC3O60481 467 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 BCAS1O75363 584 aaPredicted RBP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 WISP1O95388 367 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 BCHEP06276 602 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 COX4I1P13073 169 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 RPS4Y1P22090 263 aaKnown RBP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 ANXA11P50995 505 aaKnown RBP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 ZNF117Q03924 483 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 SRSF1Q07955 248 aaKnown RBP eCLIP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 LRRC74BQ6ZQY2 392 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 ANKS4BQ8N8V4 417 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 ZNF524Q96C55 264 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 LRRC58Q96CX6 371 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 RCN3Q96D15 328 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 TMEM19Q96HH6 336 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 RSPO3Q9BXY4 272 aaPredicted RBP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 HOXD1Q9GZZ0 328 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
CBWD3-217ENST00000621474 L3MBTL1Q9Y468 752 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
CBWD3-217ENST00000621474 TRGV5A0A0B4J1U4 118 aa13□□□□□ -0.33
CBWD3-217ENST00000621474 CLDN24A6NM45 220 aa13□□□□□ -0.33
CBWD3-217ENST00000621474 SLC19A2O60779 497 aa13□□□□□ -0.33
CBWD3-217ENST00000621474 HPGDP15428 266 aa13□□□□□ -0.33
CBWD3-217ENST00000621474 PPIBP23284 216 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms