RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 HEATR5AQ86XA9 2040 aa7.09□□□□□ -1.28
CLK1-215ENST00000621181 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 GOLGA8QA0A0J9YX86 632 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 A0A1W2PNV4 684 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 GOLGA8OA6NCC3 632 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 GOLGA8NF8WBI6 632 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 UBXN8O00124 270 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ACOT8O14734 319 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 SIAH2O43255 324 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 DENRO43583 198 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 TNFSF13O75888 250 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 SNUPNO95149 360 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 GPX3P22352 226 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 EPHA3P29320 983 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 BSGP35613 385 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 SERPINB5P36952 375 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ARL1P40616 181 aaPredicted RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 STARP49675 285 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 XKP51811 444 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 GFRA1P56159 465 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 MS4A2Q01362 244 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CPSF6Q16630 551 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLK1-215ENST00000621181 C11orf91Q3C1V1 193 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 TCHHL1Q5QJ38 904 aaPredicted RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 LIPJQ5W064 366 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 DESI1Q6ICB0 168 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PGAM4Q8N0Y7 254 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PQLC1Q8N2U9 271 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 OR7G1Q8NGA0 311 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 OR4K14Q8NGD5 310 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 UBTD2Q8WUN7 234 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CCDC124Q96CT7 223 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 OMA1Q96E52 524 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 DTNBP1Q96EV8 351 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ZC3HAV1LQ96H79 300 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 SFXN2Q96NB2 322 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 NODALQ96S42 347 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 MRPL57Q9BQC6 102 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 SLC39A3Q9BRY0 314 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 BRINP2Q9C0B6 783 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ZBTB26Q9HCK0 441 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 XPR1Q9UBH6 696 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 BCAP29Q9UHQ4 241 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CFL2Q9Y281 166 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 DTX4Q9Y2E6 619 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ACOT9Q9Y305 439 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CHD3Q12873 2000 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 A0A087X1B8 175 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PRSS51A0A1B0GVH4 220 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 H0YIV9 168 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 KERAO60938 352 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 UGT2B11O75310 529 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 BCAS2O75934 225 aaPredicted RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 TGM6O95932 706 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PABPC4LP0CB38 370 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 SMIM18P0DKX4 95 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 POU2F1P14859 743 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 NAGAP17050 411 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CRYGSP22914 178 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 TCEA1P23193 301 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 UGT2B10P36537 528 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CD79BP40259 229 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PTH2RP49190 550 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 LHX2P50458 406 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CYLC2Q14093 348 aaPredicted RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 TECRLQ5HYJ1 363 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 CFAP157Q5JU67 520 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 OR2A2Q6IF42 318 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 TMEM81Q6P7N7 255 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 C16orf89Q6UX73 402 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 NUP54Q7Z3B4 507 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ISCA2Q86U28 154 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 LILRA2Q8N149 483 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 WDSUB1Q8N9V3 476 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 RCN3Q96D15 328 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ATOH8Q96SQ7 321 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 TSC22D3Q99576 134 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PIGQQ9BRB3 760 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 ITPAQ9BY32 194 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 NUF2Q9BZD4 464 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 GSX2Q9BZM3 304 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 OR2B2Q9GZK3 357 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 MRPL46Q9H2W6 279 aaKnown RBP7.08□□□□□ -1.28
CLK1-215ENST00000621181 TNFRSF12AQ9NP84 129 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 DKKL1Q9UK85 242 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 DLGAP4Q9Y2H0 992 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 TSC22D4Q9Y3Q8 395 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 MXRA5Q9NR99 2828 aa7.08□□□□□ -1.28
CLK1-215ENST00000621181 PRAMEF25A6NGN4 478 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 SLC22A20A6NK97 555 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 SYCE1LA8MT33 242 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 TMEM233B4DJY2 109 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 C16orf97H3BN30 126 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 AIM2O14862 343 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 ACOX3O15254 700 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 UGDHO60701 494 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 DNAJA2O60884 412 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 CRHP06850 196 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 LTA4HP09960 611 aaKnown RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 ZCCHC18P0CG32 403 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms