RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ZXDAP98168 799 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 DYNC1I2Q13409 638 aaKnown RBP16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 SERTAD2Q14140 314 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 SPCS2Q15005 226 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 OR1Q1Q15612 314 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 CTF1Q16619 201 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 TMEM201Q5SNT2 666 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 MFSD4BQ5TF39 518 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 WDR74Q6RFH5 385 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 KANSL1Q7Z3B3 1105 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 PRSS42Q7Z5A4 293 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 OR8J1Q8NGP2 316 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 CNOT9Q92600 299 aaKnown RBP16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 PRSS27Q9BQR3 290 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 SLC25A19Q9HC21 320 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 NLGN3Q9NZ94 848 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 EFCAB10A6NFE3 127 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 SOX30O94993 753 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CLPSP04118 112 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CT45A8P0DMV1 189 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CT45A9P0DMV2 189 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CT45A2Q5DJT8 189 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 WDR88Q6ZMY6 472 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ARHGAP22Q7Z5H3 698 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 GPR135Q8IZ08 494 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CACTIN-AS1Q8N1I8 211 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF615Q8N8J6 731 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TEX47Q8TBZ9 253 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TRUB1Q8WWH5 349 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TSLPQ969D9 159 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ITPAQ9BY32 194 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PRMT8Q9NR22 394 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 GMEB2Q9UKD1 530 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PILRBQ9UKJ0 227 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ATXN7L1Q9ULK2 861 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TNRC6BQ9UPQ9 1833 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PI4KAP42356 2102 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 A8MUA0 341 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 C17orf105B2RV13 164 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TLX2O43763 284 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PRKNO60260 465 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 SLC15A1P46059 708 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 GCGRP47871 477 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PCYT1AP49585 367 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 RASSF6Q6ZTQ3 369 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TMPRSS9Q7Z410 1059 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 FCGR1BQ92637 280 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PIGKQ92643 395 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF578Q96N58 590 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 PHOX2BQ99453 314 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 NDC1Q9BTX1 674 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ARMC7Q9H6L4 198 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 Q9N2J8 555 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 TIMMDC1Q9NPL8 285 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 ENAMQ9NRM1 1142 aa16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CNOT2Q9NZN8 540 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-205ENST00000617641 CPED1A4D0V7 1026 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 FOXD2O60548 495 aaPredicted RBP16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 GABARAPO95166 117 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 LYPD3O95274 346 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 PTHP01270 115 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 ADORA3P0DMS8 318 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 FPR3P25089 353 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 TGFBR2P37173 567 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 SMSP52788 366 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 IRF3Q14653 427 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 MINDY4Q4G0A6 757 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 CLEC12AQ5QGZ9 265 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 C1orf189Q5VU69 101 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 GUSBP11Q6P575 273 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 P2RY8Q86VZ1 359 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 TOR1AIP2Q8NFQ8 470 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 CLIP3Q96DZ5 547 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 MVB12AQ96EY5 273 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 Q96MT0 163 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 POLDIP3Q9BY77 421 aaKnown RBP16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 ADAMTS20P59510 1910 aa16.04■□□□□ 0.16
PCDHGC3-205ENST00000617641 A0A1B0GTQ1 180 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 M0R082 166 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 AGRPO00253 132 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 KLF4O43474 513 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 CDK4P11802 303 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 DRD5P21918 477 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 LSM3P62310 102 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF321PQ8N8H1 164 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 POGLUT1Q8NBL1 392 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 PTPMT1Q8WUK0 201 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 GAB3Q8WWW8 586 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 PELOQ9BRX2 385 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 FGF21Q9NSA1 209 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 TESQ9UGI8 421 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 CBLCQ9ULV8 474 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 OR10H1Q9Y4A9 318 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 CDC42EP2O14613 210 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 BCL10O95999 233 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 LIPAP38571 399 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 EFNA3P52797 238 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 CSTF1Q05048 431 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 SNAPC1Q16533 368 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms