RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RFPL4BQ6ZWI9 263 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF534Q76KX8 674 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 ZSCAN4Q8NAM6 433 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 TMEM239Q8WW34 195 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 RAB40AQ8WXH6 277 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 MMABQ96EY8 250 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 EGLN2Q96KS0 407 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 OR2M4Q96R27 311 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF416Q9BWM5 594 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 NELFAQ9H3P2 528 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 NTN4Q9HB63 628 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 USP22Q9UPT9 525 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 ATG4BQ9Y4P1 393 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 OIP5O43482 229 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 KNG1P01042 644 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 APEX1P27695 318 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 PKLRP30613 574 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 SGSHP51688 502 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 CXADRP78310 365 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 AWAT2Q6E213 333 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 PODNL1Q6PEZ8 512 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 MAMDC2Q7Z304 686 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 SLAIN1Q8ND83 568 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 NPLOC4Q8TAT6 608 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 SFXN5Q8TD22 340 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 KIAA1143Q96AT1 154 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 TEPSINQ96N21 525 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 WDR77Q9BQA1 342 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC25A18Q9H1K4 315 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 IL21RQ9HBE5 538 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 SLCO3A1Q9UIG8 710 aa10.06□□□□□ -0.8
CLTCL1-209ENST00000617103 MYO18AQ92614 2054 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 NFYAP23511 347 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 HOXA11P31270 313 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 CAV2P51636 162 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ADARB1P78563 741 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SIM1P81133 766 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 TEAD2Q15562 447 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 PDSS1Q5T2R2 415 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 APOOLQ6UXV4 268 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 RASGRP3Q8IV61 690 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 MFSD6LQ8IWD5 586 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SGPP2Q8IWX5 399 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 OR4N5Q8IXE1 308 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC7A6Q92536 515 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 C11orf54Q9H0W9 315 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 DCDC2BA2VCK2 349 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 RFXAPO00287 272 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 FZD7O75084 574 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SOD2P04179 222 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 CCNOP22674 350 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 MBTPS1Q14703 1052 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 C7orf61Q8IZ16 206 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 GLYATL2Q8WU03 294 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 FOXRED1Q96CU9 486 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ARL5BQ96KC2 179 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 C4orf36Q96KX1 117 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SPIN2AQ99865 258 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SPIN2BQ9BPZ2 258 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF442Q9H7R0 627 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 PIM1P11309 404 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 RAB28P51157 221 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF84P51523 738 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF140P52738 457 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 CAV3P56539 151 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 PGGHGQ32M88 737 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 PGAP1Q75T13 922 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ARHGAP12Q8IWW6 846 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 WDSUB1Q8N9V3 476 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC35B4Q969S0 331 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 MS4A4EQ96PG1 132 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 DMRT3Q9NQL9 472 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 B3GNT2Q9NY97 397 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 KLHL42Q9P2K6 505 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 NDRG2Q9UN36 371 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 RNF215Q9Y6U7 377 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 WASH4PA8MWX3 477 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 FRS3O43559 492 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SCO2O43819 266 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SRPX2O60687 465 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 CDC123O75794 336 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SNAI1O95863 264 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 ETV1P50549 477 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 GALK2Q01415 458 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 DEFA6Q01524 100 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 CRHR2Q13324 411 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 LYPD4Q6UWN0 246 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 MALSU1Q96EH3 234 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
CLTCL1-209ENST00000617103 SMG9Q9H0W8 520 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms