RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PRTFDC1Q9NRG1 225 aa14.59□□□□□ -0.07
NR1H3-235ENST00000616973 C14orf105Q9NVL8 296 aa14.59□□□□□ -0.07
NR1H3-235ENST00000616973 HCN3Q9P1Z3 774 aa14.59□□□□□ -0.07
NR1H3-235ENST00000616973 CLEC2DQ9UHP7 191 aa14.59□□□□□ -0.07
NR1H3-235ENST00000616973 ZNF223Q9UK11 482 aaPredicted RBP14.59□□□□□ -0.07
NR1H3-235ENST00000616973 CDH10Q9Y6N8 788 aa14.59□□□□□ -0.07
NR1H3-235ENST00000616973 TGFBR3LH3BV60 316 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 CLDN4O14493 209 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 PIP5K1CO60331 668 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 GNSP15586 552 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 GPR4P46093 362 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 EMDP50402 254 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 EPHA4P54764 986 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 RPL6Q02878 288 aaKnown RBP14.58□□□□□ -0.07
NR1H3-235ENST00000616973 STX4Q12846 297 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 MLLT11Q13015 90 aaPredicted RBP14.58□□□□□ -0.07
NR1H3-235ENST00000616973 DOC2BQ14184 412 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 GDPGP1Q6ZNW5 385 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 GRAMD2AQ8IUY3 354 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 CAMKK1Q8N5S9 505 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 ANKK1Q8NFD2 765 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 RBM18Q96H35 190 aaKnown RBP14.58□□□□□ -0.07
NR1H3-235ENST00000616973 PEX11GQ96HA9 241 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 ZNF578Q96N58 590 aaPredicted RBP14.58□□□□□ -0.07
NR1H3-235ENST00000616973 CD180Q99467 661 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 ZNF559Q9BR84 538 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 CENPOQ9BU64 300 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 FOXQ1Q9C009 403 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 HHATLQ9HCP6 504 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 CLDN16Q9Y5I7 305 aa14.58□□□□□ -0.07
NR1H3-235ENST00000616973 NPIPA5A0A0B4J1W7 369 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 LOC100506127A0A0U1RQW1 187 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 FITM1A5D6W6 292 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 NPIPA7E9PJI5 369 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 HMGN1P05114 100 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 NPIPA8P0DM63 369 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 CKMT1AP12532 417 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 MLLT3P42568 568 aaPredicted RBP14.58□□□□□ -0.08
NR1H3-235ENST00000616973 C1DQ13901 141 aaKnown RBP14.58□□□□□ -0.08
NR1H3-235ENST00000616973 ZSWIM7Q19AV6 140 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 C14orf28Q4W4Y0 310 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 ZNF613Q6PF04 617 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 OR4Q3Q8NH05 313 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 SLC35B4Q969S0 331 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 VSTM2LQ96N03 204 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 CHCHD6Q9BRQ6 235 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 TBCCD1Q9NVR7 557 aa14.58□□□□□ -0.08
NR1H3-235ENST00000616973 ANKRD33BA6NCL7 494 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 TTC36A6NLP5 189 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 H0YIG0 161 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 MYL12BO14950 172 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 DSCR3O14972 297 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 SURF4O15260 269 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 ZNF749O43361 778 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 SULT1C4O75897 302 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 HBQ1P09105 142 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 GKN3PP0CG01 181 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 BMP4P12644 408 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 GALNSP34059 522 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 FNTBP49356 437 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 HSD17B7P56937 341 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 PRKCDQ05655 676 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 BIKQ13323 160 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 TMED1Q13445 227 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 INAQ16352 499 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 PGGHGQ32M88 737 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 FLYWCH1Q4VC44 716 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 SPEM1Q8N4L4 309 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 BRIX1Q8TDN6 353 aaKnown RBP14.57□□□□□ -0.08
NR1H3-235ENST00000616973 CHPT1Q8WUD6 406 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 HLA-CQ95604 372 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 PDE7BQ9NP56 450 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 ENAMQ9NRM1 1142 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 ETAA1Q9NY74 926 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 SEC14L4Q9UDX3 406 aa14.57□□□□□ -0.08
NR1H3-235ENST00000616973 IGHV5-51A0A0C4DH38 117 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 PRAMEF2O60811 474 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 MTNR1AP48039 350 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 PLAURQ03405 335 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 DEFB133Q30KQ1 61 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 TUBA3EQ6PEY2 450 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 ZAR1Q86SH2 424 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 OR2T33Q8NG76 320 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 B4GALNT2Q8NHY0 566 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 TMEM239Q8WW34 195 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 RFKQ969G6 155 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 RNFT2Q96EX2 444 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 ZDHHC12Q96GR4 267 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 HSPA12BQ96MM6 686 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 HS6ST2Q96MM7 605 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 DGAT2Q96PD7 388 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 PELOQ9BRX2 385 aaKnown RBP14.56□□□□□ -0.08
NR1H3-235ENST00000616973 RBCK1Q9BYM8 510 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 MIR1-1HGQ9H1L0 117 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 ISYNA1Q9NPH2 558 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 FAIMQ9NVQ4 179 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 NDUFB11Q9NX14 153 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 TMEM5Q9Y2B1 443 aa14.56□□□□□ -0.08
NR1H3-235ENST00000616973 EXOSC1Q9Y3B2 195 aaKnown RBP14.56□□□□□ -0.08
NR1H3-235ENST00000616973 TMEM129A0AVI4 362 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms