RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ZNF764	Q96H86	408 aa	Predicted RBP	12.96	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TBX5	Q99593	518 aa		12.96	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TMED9	Q9BVK6	235 aa		12.96	□□□□□ -0.33
CACNA1C-231	ENST00000616390	POU2F3	Q9UKI9	436 aa		12.96	□□□□□ -0.33
CACNA1C-231	ENST00000616390	DIMT1	Q9UNQ2	313 aa	Known RBP	12.96	□□□□□ -0.33
CACNA1C-231	ENST00000616390		A0A1W2PQF6	199 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ZC3H12D	A2A288	527 aa	Known RBP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	TFEC	O14948	347 aa	Predicted RBP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	UBXN7	O94888	489 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	APBB3	O95704	486 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	APOA1	P02647	267 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	THY1	P04216	161 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CDH11	P55287	796 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	DEFA1	P59665	94 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	DEFA3	P59666	94 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	DLX2	Q07687	328 aa	Predicted RBP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	MLLT11	Q13015	90 aa	Predicted RBP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NDUFA9	Q16795	377 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	FAM214A	Q32MH5	1076 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CLVS2	Q5SYC1	327 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SHE	Q5VZ18	495 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	FIGNL1	Q6PIW4	674 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	GDF7	Q7Z4P5	450 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	OR4K14	Q8NGD5	310 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ASB15	Q8WXK1	588 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SLC41A3	Q96GZ6	507 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NEDD4L	Q96PU5	975 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SECISBP2	Q96T21	854 aa	Known RBP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CPNE5	Q9HCH3	593 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ABCB9	Q9NP78	766 aa		12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	TES	Q9UGI8	421 aa	Known RBP	12.96	□□□□□ -0.34
CACNA1C-231	ENST00000616390	HYKK	A2RU49	373 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ZNF670-ZNF695	F2Z2N8	137 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	PRG2	P13727	222 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	M6PR	P20645	277 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	GSTM3	P21266	225 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	WNT4	P56705	351 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SRSF5	Q13243	272 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	BAK1	Q16611	211 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ZNF791	Q3KP31	576 aa	Predicted RBP	12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	KLHL22	Q53GT1	634 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	FAM131A	Q6UXB0	335 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	FRRS1	Q6ZNA5	592 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	AKAP14	Q86UN6	197 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	OR4Q3	Q8NH05	313 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	DIO2	Q92813	273 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	HDHD5	Q9BXW7	423 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	KIR3DX1	Q9H7L2	352 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	MED20	Q9H944	212 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SDHAF3	Q9NRP4	125 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	OR6C2	Q9NZP2	312 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	MALT1	Q9UDY8	824 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	HEBP2	Q9Y5Z4	205 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	PRODH	O43272	600 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	HYAL3	O43820	417 aa	Predicted RBP	12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ACP2	P11117	423 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NT5E	P21589	574 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	IFNGR2	P38484	337 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	TSPAN31	Q12999	210 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	GPR18	Q14330	331 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	EXOSC7	Q15024	291 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	MFSD12	Q6NUT3	480 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NRARP	Q7Z6K4	114 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	GAL3ST3	Q96A11	431 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	MOAP1	Q96BY2	351 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SAMD8	Q96LT4	415 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CACYBP	Q9HB71	228 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CLCA2	Q9UQC9	943 aa		12.95	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CDC42EP2	O14613	210 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	LALBA	P00709	142 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	UGT2B7	P16662	529 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	OMP	P47874	163 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SLC16A1	P53985	500 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	RPS15A	P62244	130 aa	Known RBP	12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ZNF836	Q6ZNA1	936 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	DIRAS2	Q96HU8	199 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	BMF	Q96LC9	184 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	C10orf90	Q96M02	699 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	RBCK1	Q9BYM8	510 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	DPH1	Q9BZG8	443 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	IFT22	Q9H7X7	185 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	COMMD3	Q9UBI1	195 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NCKAP1	Q9Y2A7	1128 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SPEF1	Q9Y4P9	236 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	UGT2A1	Q9Y4X1	527 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390		A0A1W2PQL4	384 aa	Predicted RBP	12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	SLC35F4	A4IF30	521 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390		A6NJY4	79 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	PCP4L1	A6NKN8	68 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	PEX12	O00623	359 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	B3GALT2	O43825	422 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	NCR1	O76036	304 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	TCEA1	P23193	301 aa	Known RBP	12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	RAC1	P63000	192 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	TNFRSF17	Q02223	184 aa		12.94	□□□□□ -0.34
CACNA1C-231	ENST00000616390	CDC20	Q12834	499 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms