RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CEACAM5P06731 702 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GKN3PP0CG01 181 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CPMP14384 443 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 BCL6P41182 706 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LSM11P83369 360 aaKnown RBP eCLIP5.28□□□□□ -1.561e-7■■■■□ 21.6
SYNCRIP-204ENST00000616122 CRMP1Q14194 572 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ADGRF3Q8IZF5 1079 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MEIOBQ8N635 442 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 AMER3Q8N944 861 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LINC01555Q8NAE3 123 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GATSQ8NAP1 163 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 POMGNT2Q8NAT1 580 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GNPDA2Q8TDQ7 276 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RSPRY1Q96DX4 576 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MMABQ96EY8 250 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC41A3Q96GZ6 507 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 HDAC8Q9BY41 377 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC38A1Q9H2H9 487 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NANSQ9NR45 359 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MUTYHQ9UIF7 546 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 FBXL21Q9UKT6 434 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 DAPP1Q9UN19 280 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 DIMT1Q9UNQ2 313 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PCDHGB7Q9Y5F8 929 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZFC3H1O60293 1989 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A1B0GVC2 190 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A6NIN4 97 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 M0R082 166 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 XKRYO14609 159 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 COQ9O75208 318 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RPP14O95059 124 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NDUFB2O95178 105 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GYPBP06028 91 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CHRM4P08173 479 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 INHBBP09529 407 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 DRD3P35462 400 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PSMD4P55036 377 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRMT12Q53H54 448 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM196Q5HYL7 178 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 C3orf38Q5JPI3 329 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 C1orf53Q5VUE5 145 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM109BQ6ICB4 259 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZC3H14Q6PJT7 736 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LACC1Q8IV20 430 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TOMM5Q8N4H5 51 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TSTD1Q8NFU3 115 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SETD6Q8TBK2 473 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR7D2Q96RA2 312 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TBL1XR1Q9BZK7 514 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NT5DC2Q9H857 520 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 HINT3Q9NQE9 182 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 APOBEC3BQ9UH17 382 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 WDR37Q9Y2I8 494 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GRIP1Q9Y3R0 1128 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LRRK2Q5S007 2527 aa5.27□□□□□ -1.56
SYNCRIP-204ENST00000616122 RANBP2P49792 3224 aaKnown RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 OTOL1A6NHN0 477 aaPredicted RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 ADAM23O75077 832 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 GCM2O75603 506 aaPredicted RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC25A12O75746 678 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 LGI1O95970 557 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 SCG5P05408 212 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 THEGLP0DJG4 465 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZNF3P17036 446 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 C4BPBP20851 252 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 OPRD1P41143 372 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 ETV6P41212 452 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 SNRPGP62308 76 aaKnown RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 PPP3R1P63098 170 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 HTRA4P83105 476 aaPredicted RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 SEC23BQ15437 767 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 CNIH2Q6PI25 160 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 LAX1Q8IWV1 398 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 CLDN22Q8N7P3 220 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 TP63Q9H3D4 680 aaPredicted RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 KLHL31Q9H511 634 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 KIR3DX1Q9H7L2 352 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 TXNL4BQ9NX01 149 aaKnown RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 DIDO1Q9BTC0 2240 aaKnown RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 LOC105369274A0A096LPK9 316 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 TSPAN11A1L157 253 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 CD8B2A6NJW9 211 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 POLR1CO15160 346 aaPredicted RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 CD8BP10966 210 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 IFITM3Q01628 133 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 AMZ1Q400G9 498 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 PAMR1Q6UXH9 720 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 SPATC1Q76KD6 591 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR4N4Q8N0Y3 316 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 PATE1Q8WXA2 126 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 HS6ST2Q96MM7 605 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 TTYH2Q9BSA4 534 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 GPR174Q9BXC1 333 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 TCF7L1Q9HCS4 588 aa5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 SRA1Q9HD15 236 aaKnown RBP5.27□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZNF226Q9NYT6 803 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms