RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ARPC1BO15143 372 aaKnown RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 ZNF821O75541 412 aaPredicted RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 UBXN7O94888 489 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 HOXD4P09016 255 aaPredicted RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 MPC1LP0DKB6 136 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 NCBP2P52298 156 aaKnown RBP eCLIP12.33□□□□□ -0.441e-9■□□□□ 10.8
MSH6-214ENST00000616033 CAMK2DQ13557 499 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 OPCMLQ14982 345 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 TMEM201Q5SNT2 666 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ALG14Q96F25 216 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ALG8Q9BVK2 526 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 LIN7BQ9HAP6 207 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ZDHHC4Q9NPG8 344 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 CUEDC1Q9NWM3 386 aaPredicted RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 KCND3Q9UK17 655 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 RCE1Q9Y256 329 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 SSX5O60225 188 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 CLUP10909 449 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 CKBP12277 381 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SMIM11AP58511 58 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SIM1P81133 766 aaPredicted RBP12.32□□□□□ -0.44
MSH6-214ENST00000616033 COL28A1Q2UY09 1125 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SFXN4Q6P4A7 337 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 OR5M3Q8NGP4 307 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 OR10Z1Q8NGY1 313 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 OR4Q3Q8NH05 313 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
MSH6-214ENST00000616033 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 DLL4Q9NR61 685 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 NFKBIL1Q9UBC1 381 aaPredicted RBP12.32□□□□□ -0.44
MSH6-214ENST00000616033 PLCL2Q9UPR0 1127 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 VWA8A3KMH1 1905 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 ANKRD61A6NGH8 418 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 KPNA3O00505 521 aaPredicted RBP12.32□□□□□ -0.44
MSH6-214ENST00000616033 STK25O00506 426 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 CHST10O43529 356 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 RNF13O43567 381 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SLC19A2O60779 497 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 PRG2P13727 222 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 GABRR2P28476 465 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 GCGRP47871 477 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 ZNF311Q5JNZ3 666 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 ZNF697Q5TEC3 545 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 C22orf39Q6P5X5 142 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 FCRL1Q96LA6 429 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SEMA4CQ9C0C4 833 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 HINT3Q9NQE9 182 aaKnown RBP12.32□□□□□ -0.44
MSH6-214ENST00000616033 PRDM9Q9NQV7 894 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
MSH6-214ENST00000616033 SGK494L7N484 410 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 PLPP1O14494 284 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 GNB5O14775 395 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 GMDSO60547 372 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 FMO6PO60774 539 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 MMP20O60882 483 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ADAMTS4O75173 837 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 BTCP35070 178 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 MINDY4Q4G0A6 757 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 CYB5R2Q6BCY4 276 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 CDC73Q6P1J9 531 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 NHLRC1Q6VVB1 395 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 NLRC3Q7RTR2 1065 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 OR2T4Q8NH00 348 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 SCLYQ96I15 445 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 SEMA4GQ9NTN9 838 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 P2RX2Q9UBL9 471 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 SESN1Q9Y6P5 492 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 OR1F1O43749 312 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 PQBP1O60828 265 aaKnown RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 EFCAB14O75071 495 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 RGS9O75916 674 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 SPDEFO95238 335 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 RRASP10301 218 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 HLA-FP30511 346 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ERVK-25P63136 954 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 SP140Q13342 867 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ARHGAP15Q53QZ3 475 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 HES5Q5TA89 166 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 TMEM107Q6UX40 140 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 RNF180Q86T96 592 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ZNF614Q8N883 585 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 RELL2Q8NC24 303 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 C17orf47Q8NEP4 570 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 RAD51AP1Q96B01 352 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 CAPNS2Q96L46 248 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 LSM7Q9UK45 103 aaKnown RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 ZNF593O00488 134 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 SOCS5O75159 536 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 LEFTY1O75610 366 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 C9orf64Q5T6V5 341 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms