RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CCNJQ5T5M9 372 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF627Q7L945 461 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 LINGO2Q7L985 606 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 ABHD12BQ7Z5M8 362 aaPredicted RBP8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF683Q8IZ20 524 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 CCL4L1Q8NHW4 92 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 PHF12Q96QT6 1004 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 TMEM185BQ9H7F4 350 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 TESQ9UGI8 421 aaKnown RBP8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 CDH10Q9Y6N8 788 aa8.85□□□□□ -0.99
CLTCL1-208ENST00000615606 CRABP1P29762 137 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 IDUAP35475 653 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC6A12P48065 614 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 RIDAP52758 137 aaKnown RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 DMWDQ09019 674 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 HLA-BQ31612 363 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF367Q7RTV3 350 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 UBE2Q1Q7Z7E8 422 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ALG14Q96F25 216 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 LRR1Q96L50 414 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 IP6K3Q96PC2 410 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 WDR83Q9BRX9 315 aaKnown RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 NMNAT1Q9HAN9 279 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 C2orf42Q9NWW7 574 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 GLS2Q9UI32 602 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 LRIT2A6NDA9 550 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 FABP12A6NFH5 140 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 GKN3PP0CG01 181 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 CDKN2CP42773 168 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 BCAP31P51572 246 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SIGLEC14Q08ET2 396 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ODF4Q2M2E3 257 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 FAM111BQ6SJ93 734 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 WDR53Q7Z5U6 358 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 NLGN4YQ8NFZ3 816 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 OR2T11Q8NH01 316 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 OR4K13Q8NH42 304 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 OLIG1Q8TAK6 271 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 NXPE2Q96DL1 559 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SGPP1Q9BX95 441 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ASIC5Q9NY37 505 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 EMC3Q9P0I2 261 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC7A11Q9UPY5 501 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF264O43296 627 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 BMP2P12643 396 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 GGT2P36268 569 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 GALK2Q01415 458 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SYPL1Q16563 259 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 LIX1LQ8IVB5 337 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 OR4K3Q96R72 315 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 PITX2Q99697 317 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 DPH1Q9BZG8 443 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 PIGUQ9H490 435 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 FOLH1BQ9HBA9 442 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 THSD1Q9NS62 852 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC23A2Q9UGH3 650 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 CNOT11Q9UKZ1 510 aaKnown RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 FRS3O43559 492 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 NME1P15531 152 aaKnown RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 CDH15P55291 814 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 LIM2P55344 173 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 RIN1Q13671 783 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 TUBA3CQ13748 450 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 TNFAIP8L3Q5GJ75 292 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 C6orf141Q5SZD1 244 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC18B1Q6NT16 456 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 CBLL1Q75N03 491 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 SHFQ7M4L6 423 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ACBD7Q8N6N7 88 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 TMEM178AQ8NBL3 297 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 TP53I13Q8NBR0 393 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ACOT11Q8WXI4 607 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 MS4A6EQ96DS6 147 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 ZFP3Q96NJ6 502 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 CPPED1Q9BRF8 314 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 MBD2Q9UBB5 411 aa8.84□□□□□ -0.99
CLTCL1-208ENST00000615606 TMEM221A6NGB7 291 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 M0R296 226 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 HCRTR1O43613 425 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 ZNF432O94892 652 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 MTHFD2P13995 350 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 ACVR1BP36896 505 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 MPLP40238 635 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 ZNF829Q3KNS6 432 aaPredicted RBP8.83□□□□□ -1
CLTCL1-208ENST00000615606 GLT8D1Q68CQ7 371 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 FAM71E1Q6IPT2 247 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 TMEM71Q6P5X7 295 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 TMEM17Q86X19 198 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 HS3ST5Q8IZT8 346 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 MVB12AQ96EY5 273 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 AMDHD1Q96NU7 426 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 GPR78Q96P69 363 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 DCSTAMPQ9H295 470 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 FAM118AQ9NWS6 357 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 PTTG2Q9NZH5 202 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 SLC6A5Q9Y345 797 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 ATG4BQ9Y4P1 393 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 SH3D21A4FU49 640 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 CLDN25C9JDP6 229 aa8.83□□□□□ -1
CLTCL1-208ENST00000615606 CCNKO75909 580 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms