RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 MED12LQ86YW9 2145 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 CYSRT1A8MQ03 144 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 NDUFB5O43674 189 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 IL6P05231 212 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 OR12D1P0DN82 309 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 GP1BBP13224 206 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 CHI3L1P36222 383 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-211ENST00000615061 STARP49675 285 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 GFRA1P56159 465 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 NUP107P57740 925 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 NHSL2Q5HYW2 709 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 IFNEQ86WN2 208 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 ULK2Q8IYT8 1036 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 PNPT1Q8TCS8 783 aaKnown RBP15.18■□□□□ 0.02
CBWD3-211ENST00000615061 SDF2Q99470 211 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 SDHAF3Q9NRP4 125 aa15.18■□□□□ 0.02
CBWD3-211ENST00000615061 FCMRO60667 390 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 NGFRP08138 427 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 ATP6V1C1P21283 382 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 DCTP40126 519 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 DSCR4P56555 118 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-211ENST00000615061 C17orf67Q0P5P2 114 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 GTDC1Q4AE62 458 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 FLYWCH1Q4VC44 716 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.17■□□□□ 0.02
CBWD3-211ENST00000615061 B3GNT6Q6ZMB0 384 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 RNF130Q86XS8 419 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 FUNDC1Q8IVP5 155 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 EID3Q8N140 333 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 OR5M1Q8NGP8 315 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 MIPOL1Q8TD10 442 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 XAGE5Q8WWM1 108 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 SDCCAG3Q96C92 435 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 WDYHV1Q96HA8 205 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 SH3YL1Q96HL8 342 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-211ENST00000615061 TTYH2Q9BSA4 534 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 PRDM14Q9GZV8 571 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 CAMK2AQ9UQM7 478 aa15.17■□□□□ 0.02
CBWD3-211ENST00000615061 CENPVL1A0A0U1RR11 272 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SCDO00767 359 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 RFXANKO14593 260 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 WDR1O75083 606 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 GLI4P10075 376 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 HPGDP15428 266 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 GRNP28799 593 aaKnown RBP15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SMSP52788 366 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 B3GALT5-AS1P59052 145 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 GUCY1A3Q02108 690 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 FUT5Q11128 374 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 HSP90B2PQ58FF3 399 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 C1orf185Q5T7R7 199 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SEM1Q6ZVN7 128 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 CCDC71Q8IV32 467 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-211ENST00000615061 C1GALT1C1Q96EU7 318 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SFXN2Q96NB2 322 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 CCDC167Q9P0B6 97 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 KCNE5Q9UJ90 142 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 PCDHGB3Q9Y5G1 929 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 FAM234BA2RU67 622 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 PRAMEF27A3QJZ7 478 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 DUXAA6NLW8 204 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SHISA8B8ZZ34 492 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 NPIPB9F8W1W9 429 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 OIP5O43482 229 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 HK1P19367 917 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 ADH7P40394 386 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 STX1BP61266 288 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SRYQ05066 204 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SF3A3Q12874 501 aaKnown RBP eCLIP15.16■□□□□ 0.02
CBWD3-211ENST00000615061 GPR68Q15743 365 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 COX20Q5RI15 118 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 HEPHL1Q6MZM0 1159 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 XKRXQ6PP77 449 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 SLC2A7Q6PXP3 512 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 ARSKQ6UWY0 536 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 PLXDC2Q6UX71 529 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 ZNF614Q8N883 585 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 CHDHQ8NE62 594 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-211ENST00000615061 AURKBQ96GD4 344 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-211ENST00000615061 NPAS1Q99742 590 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 MKLN1Q9UL63 735 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 RNF6Q9Y252 685 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 VDAC3Q9Y277 283 aa15.16■□□□□ 0.02
CBWD3-211ENST00000615061 MRPS18CQ9Y3D5 142 aaKnown RBP15.16■□□□□ 0.02
CBWD3-211ENST00000615061 A0A0G2JND7 137 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 HMGN4O00479 90 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 ACTL6AO96019 429 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 GABRA1P14867 456 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 LCN1P31025 176 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 MRPL19P49406 292 aaKnown RBP15.15■□□□□ 0.02
CBWD3-211ENST00000615061 NDUFAF6Q330K2 333 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 ARHGAP11BQ3KRB8 267 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 ACSF3Q4G176 576 aaPredicted RBP15.15■□□□□ 0.02
CBWD3-211ENST00000615061 KLHL26Q53HC5 615 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 RAET1LQ5VY80 246 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 TMEM211Q6ICI0 200 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 CBLN3Q6UW01 205 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 C16orf62Q7Z3J2 963 aa15.15■□□□□ 0.02
CBWD3-211ENST00000615061 TRIML2Q8N7C3 387 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms