RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 AURKCQ9UQB9 309 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 OR10H1Q9Y4A9 318 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 AP4S1Q9Y587 144 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 HIVEP3Q5T1R4 2406 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 AGAP5A6NIR3 686 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 NPIPB9F8W1W9 429 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 H0Y3Z8 333 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 SYT5O00445 386 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 HNRNPRO43390 633 aaKnown RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 PRKNO60260 465 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 FCMRO60667 390 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 ZFAND5O76080 213 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 IL33O95760 270 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 IGKV1D-16P01601 117 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 ATP6V1C1P21283 382 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 PRKAR1BP31321 381 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 OTX2P32243 289 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 KCNJ5P48544 419 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 PSMD4P55036 377 aaKnown RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 KCNJ10P78508 379 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 KLRB1Q12918 225 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 NNATQ16517 81 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 IFI44LQ53G44 452 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 CCNJQ5T5M9 372 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 FBXW10Q5XX13 1052 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 FIGNL1Q6PIW4 674 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 DHRS4L2Q6PKH6 230 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 PEX5LQ8IYB4 626 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 SLC34A3Q8N130 599 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 BCORP1Q8N888 145 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 GPR32P1Q8NGA4 272 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 OR4N2Q8NGD1 307 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 SPPL2AQ8TCT8 520 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 APOBEC4Q8WW27 367 aaKnown RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 GEMIN6Q8WXD5 167 aaKnown RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 PINK1Q9BXM7 581 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 CACYBPQ9HB71 228 aaKnown RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 C6orf203Q9P0P8 240 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-212ENST00000613856 IFT52Q9Y366 437 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 V9GYQ6 96 aa10.53□□□□□ -0.72
SLIRP-212ENST00000613856 CENPEQ02224 2701 aa10.52□□□□□ -0.72
SLIRP-212ENST00000613856 DOCK10Q96BY6 2186 aa10.52□□□□□ -0.72
SLIRP-212ENST00000613856 TMEM200CA6NKL6 621 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 DNAJB5O75953 348 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 CLDN1O95832 211 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 DBIP07108 87 aaKnown RBP10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ICAM2P13598 275 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ANPEPP15144 967 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 NR0B1P51843 470 aaKnown RBP10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF141Q15928 474 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ZSWIM7Q19AV6 140 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 BTBD16Q32M84 506 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 FLYWCH1Q4VC44 716 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 LIN52Q52LA3 116 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 EIPR1Q53HC9 387 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 PRR30Q53SZ7 412 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-212ENST00000613856 RNF220Q5VTB9 566 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 OLIG3Q7RTU3 272 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 PIWIL3Q7Z3Z3 882 aaKnown RBP10.52□□□□□ -0.73
SLIRP-212ENST00000613856 VTCN1Q7Z7D3 282 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ATCAYQ86WG3 371 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ARMC10Q8N2F6 343 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 PQLC1Q8N2U9 271 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 OR52P1PQ8NH57 321 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 DIO2Q92813 273 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 TPD52L3Q96J77 140 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF354BQ96LW1 612 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 SEPHS2Q99611 448 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 CHID1Q9BWS9 393 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 EVA1AQ9H8M9 152 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF160Q9HCG1 818 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 IL1RAPQ9NPH3 570 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 FBXO34Q9NWN3 711 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 P4HTMQ9NXG6 502 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 RIMS3Q9UJD0 308 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 FBXL4Q9UKA2 621 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 MKLN1Q9UL63 735 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF443Q9Y2A4 671 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-212ENST00000613856 KCNMB2Q9Y691 235 aa10.52□□□□□ -0.73
SLIRP-212ENST00000613856 CPAMD8Q8IZJ3 1885 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 PEX12O00623 359 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 TSPAN2O60636 221 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 UGT2B17O75795 530 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 NADKO95544 446 aaPredicted RBP10.51□□□□□ -0.73
SLIRP-212ENST00000613856 FESP07332 822 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 NGFRP08138 427 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 NID1P14543 1247 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 NAGAP17050 411 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 ABCD3P28288 659 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 KRT20P35900 424 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 DCTP40126 519 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 PNLIPRP2P54317 469 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 ATP12AP54707 1039 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 NRG3P56975 720 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 EEF1A1P68104 462 aaKnown RBP10.51□□□□□ -0.73
SLIRP-212ENST00000613856 SLC34A1Q06495 639 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 PLCXD2Q0VAA5 305 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 CHAF1BQ13112 559 aa10.51□□□□□ -0.73
SLIRP-212ENST00000613856 LARS2Q15031 903 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms