RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 FUT5Q11128 374 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 CAPRIN1Q14444 709 aaKnown RBP12.1□□□□□ -0.47
MDC1-209ENST00000613547 ZNF141Q15928 474 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 SYPL1Q16563 259 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 CYP51A1Q16850 503 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 KLHL26Q53HC5 615 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 GCNT6Q5T4J0 391 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 FNDC7Q5VTL7 733 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 OR5M10Q6IEU7 315 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 ARPINQ7Z6K5 226 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 TREML1Q86YW5 311 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 OR8J3Q8NGG0 315 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 LRRC58Q96CX6 371 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 GNRHR2Q96P88 292 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 SAP130Q9H0E3 1048 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 DEFB127Q9H1M4 99 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 EXO5Q9H790 373 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 MTHFD2LQ9H903 347 aaPredicted RBP12.1□□□□□ -0.47
MDC1-209ENST00000613547 DKKL1Q9UK85 242 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 NPIPA5A0A0B4J1W7 369 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 A0A0G2JPF8 293 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 SERINC4A6NH21 518 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 HNRNPCL2B2RXH8 293 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 HNRNPCL3B7ZW38 293 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 FAM47E-STBD1D6RA91 191 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 NPIPA7E9PJI5 369 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 J3QKU1 62 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 HCRTR2O43614 444 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 HCN1O60741 890 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 HNRNPCL1O60812 293 aaKnown RBP12.09□□□□□ -0.47
MDC1-209ENST00000613547 TNFRSF21O75509 655 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 UGT2B17O75795 530 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 TFPTP0C1Z6 253 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 NPIPA8P0DM63 369 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 HNRNPCL4P0DMR1 293 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 UBL4AP11441 157 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
MDC1-209ENST00000613547 MTPNP58546 118 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 CHRNEQ04844 493 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 RBBP4Q09028 425 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 ART3Q13508 389 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 GANABQ14697 944 aaKnown RBP12.09□□□□□ -0.47
MDC1-209ENST00000613547 IGFBP7Q16270 282 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.09□□□□□ -0.47
MDC1-209ENST00000613547 PDZK1Q5T2W1 519 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 PRAMEF8Q5VWM4 474 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 PRAMEF7Q5VXH5 474 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 TYW3Q6IPR3 259 aaKnown RBP12.09□□□□□ -0.47
MDC1-209ENST00000613547 NANOGP8Q6NSW7 305 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 ARHGAP11AQ6P4F7 1023 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 APOOLQ6UXV4 268 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 FRRS1Q6ZNA5 592 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 EIF3MQ7L2H7 374 aaKnown RBP12.09□□□□□ -0.47
MDC1-209ENST00000613547 PEX5LQ8IYB4 626 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 WDSUB1Q8N9V3 476 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 GATSQ8NAP1 163 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 PHOSPHO1Q8TCT1 267 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 TMEM19Q96HH6 336 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 ECSITQ9BQ95 431 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 UBQLN3Q9H347 655 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 TMEM38AQ9H6F2 299 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 NANOGQ9H9S0 305 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 SUCOQ9UBS9 1254 aaKnown RBP12.09□□□□□ -0.47
MDC1-209ENST00000613547 AP3M1Q9Y2T2 418 aa12.09□□□□□ -0.47
MDC1-209ENST00000613547 IGLV3-32A0A0A0MS00 114 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 TRGV5A0A0B4J1U4 118 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 PRAMEF27A3QJZ7 478 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 AGAP5A6NIR3 686 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SUSD5O60279 629 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 EIF4E2O60573 245 aaKnown RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 PDE9AO76083 593 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 CBX6O95503 412 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 CSTAP01040 98 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 IGHG3P01860 377 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 HPNP05981 417 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 DBIP07108 87 aaKnown RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 CHRM4P08173 479 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 NUDT7P0C024 238 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 PLA2G2AP14555 144 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 ABOP16442 354 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SLC6A2P23975 617 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 DPP4P27487 766 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SRD5A2P31213 254 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 NUDT2P50583 147 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 MNAT1P51948 309 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 CD226Q15762 336 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 FAM91A1Q658Y4 838 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 KRT73Q86Y46 540 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SLC30A8Q8IWU4 369 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 C11orf65Q8NCR3 313 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 OR2M3Q8NG83 312 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 OR14L1PQ8NHC6 308 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 BBS10Q8TAM1 723 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms