RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 NLKQ9UBE8 527 aa11.77□□□□□ -0.52
TNFAIP3-206ENST00000612899 CAPNS1P04632 268 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 GRK1Q15835 563 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ARSKQ6UWY0 536 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 Q6ZPB1 254 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 RTL10Q7L3V2 364 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 IGFN1Q86VF2 1251 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ZNF565Q8N9K5 539 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 OR6C4Q8NGE1 309 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 TANKQ92844 425 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ACOT13Q9NPJ3 140 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 IER3IP1Q9Y5U9 82 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 C17orf113A0A1B0GUU1 675 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 FAM183AA6NL82 134 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 H0YIV9 168 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 J3KTA2 159 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 LCN1P31025 176 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 CCDC58Q4VC31 144 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 CORO6Q6QEF8 472 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ZNF584Q8IVC4 421 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 FUNDC1Q8IVP5 155 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ZNF619Q8N2I2 560 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 METTL4Q8N3J2 472 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 NDNFQ8TB73 568 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ADOQ96SZ5 270 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 TREX2Q9BQ50 279 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 CRB3Q9BUF7 120 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 CACNG6Q9BXT2 260 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 HOXD1Q9GZZ0 328 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 PRSS16Q9NQE7 514 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 NME7Q9Y5B8 376 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 SYNGR4O95473 234 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 OTX2P32243 289 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 RPE65Q16518 533 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 LEXMQ3ZCV2 418 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 TMEFF1Q8IYR6 380 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 CHDHQ8NE62 594 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 OR5K2Q8NHB8 316 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 PRRC1Q96M27 445 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 CPPED1Q9BRF8 314 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ALG8Q9BVK2 526 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 ZNF701Q9NV72 531 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 MGAT4AQ9UM21 535 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 VDAC3Q9Y277 283 aa11.77□□□□□ -0.53
TNFAIP3-206ENST00000612899 DDX60Q8IY21 1712 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 AQP9O43315 295 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 VNN2O95498 520 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 FBXO45P0C2W1 286 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 EN2P19622 333 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 M6PRP20645 277 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 PKLRP30613 574 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 NTRK2Q16620 822 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 CCSMST1Q4G0I0 132 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 TP53I3Q53FA7 332 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 HES5Q5TA89 166 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 OTUD1Q5VV17 481 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 SLCO4C1Q6ZQN7 724 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 VRK2Q86Y07 508 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 OR9A4Q8NGU2 314 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 ACOT11Q8WXI4 607 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 S100PBPQ96BU1 408 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 SAP130Q9H0E3 1048 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 KCNN3Q9UGI6 736 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 PRKYO43930 277 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 SFTPDP35247 375 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 MMP12P39900 470 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 HERV-K104P61576 105 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 EMX1Q04741 257 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 ERV3-1Q14264 604 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 ALG10Q5BKT4 473 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 LRIF1Q5T3J3 769 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 PIP5KL1Q5T9C9 394 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 PODNL1Q6PEZ8 512 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 SDR9C7Q8NEX9 313 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 OR52R1Q8NGF1 315 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 OR4K3Q96R72 315 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 A0A1B0GUL6 1792 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 RAD1O60671 282 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 GYPBP06028 91 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 LHCGRP22888 699 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 IRS1P35568 1242 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 NFATC4Q14934 902 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 BTBD16Q32M84 506 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 DCST2Q5T1A1 773 aa11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 EIF5AL1Q6IS14 154 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-206ENST00000612899 UCHL1P09936 223 aa11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 S100A2P29034 98 aa11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 GRK5P34947 590 aa11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 RPS15P62841 145 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 NLGN4YQ8NFZ3 816 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 ACOT12Q8WYK0 555 aa11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 CREB3L1Q96BA8 519 aa11.75□□□□□ -0.53
TNFAIP3-206ENST00000612899 BPIFA2Q96DR5 249 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms