RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 RAP1GDS1P52306 607 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PLA2G16P53816 162 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GFRA1P56159 465 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CLDN18P56856 261 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RAB38P57729 211 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RPS13P62277 151 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 BTN3A2P78410 334 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 BIKQ13323 160 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DDX39BQ13838 428 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MPP2Q14168 576 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GUSBP1Q15486 140 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SPIN4Q56A73 249 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 HSP90B2PQ58FF3 399 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ATG16L1Q676U5 607 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR4C11Q6IEV9 310 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DEF8Q6ZN54 512 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RPS27LQ71UM5 84 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PEG10Q86TG7 708 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NUDT13Q86X67 352 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF595Q8IYB9 648 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CDYL2Q8N8U2 506 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ANKRD42Q8N9B4 389 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KBTBD8Q8NFY9 601 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FAM76AQ8TAV0 307 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TP53INP1Q96A56 240 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ARL8AQ96BM9 186 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TMEM41AQ96HV5 264 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ADAD1Q96M93 576 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 F2RL3Q96RI0 385 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MECRQ9BV79 373 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRIM2Q9C040 744 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ALG2Q9H553 416 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DDX31Q9H8H2 851 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PRDM7Q9NQW5 492 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 THAP1Q9NVV9 213 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 LYARQ9NX58 379 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SIRT5Q9NXA8 310 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 VPS29Q9UBQ0 182 aa6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MRPS33Q9Y291 106 aaKnown RBP6.41□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SLC28A1O00337 649 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PLPP1O14494 284 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DYNC1I1O14576 645 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GNB5O14775 395 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RGS14O43566 566 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RSL1D1O76021 490 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PCSK2P16519 638 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PRPH2P23942 346 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ATP5A1P25705 553 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TLX1P31314 330 aaPredicted RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CASP3P42574 277 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SSR2P43308 183 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SLC1A6P48664 564 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MASP1P48740 699 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NEK2P51955 445 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ABCE1P61221 599 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRA2BP62995 288 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 STX3Q13277 289 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CHI3L2Q15782 390 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TTMPQ5BVD1 217 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KANK2Q63ZY3 851 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 C11orf71Q6IPW1 123 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ADNP2Q6IQ32 1131 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GALNT18Q6P9A2 607 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TMEM64Q6YI46 380 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF793Q6ZN11 406 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 P4HA3Q7Z4N8 544 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 UBE3DQ7Z6J8 389 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ATG4DQ86TL0 474 aaPredicted RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 LRRC34Q8IZ02 419 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 METTL4Q8N3J2 472 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ARFGAP2Q8N6H7 521 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ACOT4Q8N9L9 421 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FAM47BQ8NA70 645 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NUP43Q8NFH3 380 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FIG4Q92562 907 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 HTRA1Q92743 480 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SENP5Q96HI0 755 aaPredicted RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CSF3RQ99062 836 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PAIP2Q9BPZ3 127 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RBM4Q9BWF3 364 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CACNG6Q9BXT2 260 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SHCBP1LQ9BZQ2 653 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR2B2Q9GZK3 357 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ACTR6Q9GZN1 396 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR10A4Q9H209 315 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR51B5Q9H339 312 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PLSCR4Q9NRQ2 329 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF446Q9NWS9 450 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TEX10Q9NXF1 929 aaPredicted RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CISD1Q9NZ45 108 aaKnown RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TMEFF2Q9UIK5 374 aaPredicted RBP6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PHF11Q9UIL8 331 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 HAO1Q9UJM8 370 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DAPP1Q9UN19 280 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PROCRQ9UNN8 238 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SLC12A4Q9UP95 1085 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TMED5Q9Y3A6 229 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RAP2CQ9Y3L5 183 aa6.4□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRAF6Q9Y4K3 522 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms