RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 HYAL2Q12891 473 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 MELKQ14680 651 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CDK10Q15131 360 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ZNF77Q15935 545 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CLEC12AQ5QGZ9 265 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 OR5K2Q8NHB8 316 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 KHSRPQ92945 711 aaKnown RBP eCLIP6.32□□□□□ -1.4
PBX1-221ENST00000612123 CCDC74BQ96LY2 380 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 LINC00052Q96N35 136 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 BARD1Q99728 777 aaKnown RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 TUBA1CQ9BQE3 449 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ITPAQ9BY32 194 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 TUBB1Q9H4B7 451 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 H0YIV9 168 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 RGS11O94810 467 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CSTBP04080 98 aaKnown RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 ERCC1P07992 297 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 HTR1AP08908 422 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CD36P16671 472 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 S1PR1P21453 382 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ALDH3B2P48448 385 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CAV3P56539 151 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 RAB2AP61019 212 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 BTG1P62324 171 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ID2Q02363 134 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CBLBQ13191 982 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 SEC23BQ15437 767 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ZNF542PQ5EBM4 170 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ZNF595Q8IYB9 648 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 YIPF7Q8N8F6 280 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 C1orf216Q8TAB5 229 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 UBTD2Q8WUN7 234 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ZNF480Q8WV37 535 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ASB15Q8WXK1 588 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 ZNF578Q96N58 590 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 MTG2Q9H4K7 406 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 IFT46Q9NQC8 304 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 CUEDC1Q9NWM3 386 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 CDH10Q9Y6N8 788 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 TAF1P21675 1872 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 GREB1LQ9C091 1923 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 GRXCR1A8MXD5 290 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 RNF13O43567 381 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 HPGDSO60760 199 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 SIX6O95475 246 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 RLN1P04808 185 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 NDUFV2P19404 249 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 PTPRZ1P23471 2315 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 SLC6A9P48067 706 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 E2F1Q01094 437 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 YOD1Q5VVQ6 348 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 OPN5Q6U736 354 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 PPP1R3BQ86XI6 285 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 VWA5B2Q8N398 1253 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 MINDY2Q8NBR6 621 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 OR2T4Q8NH00 348 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 TRUB1Q8WWH5 349 aaKnown RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 UBXN10Q96LJ8 280 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 MROQ9BYG7 248 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 UBE2ZQ9H832 354 aaPredicted RBP6.32□□□□□ -1.4
PBX1-221ENST00000612123 MMP17Q9ULZ9 603 aa6.32□□□□□ -1.4
PBX1-221ENST00000612123 BRCA1P38398 1863 aaKnown RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 DENRO43583 198 aaKnown RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 MITFO75030 526 aaPredicted RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 SNAPC5O75971 98 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 HTR3AP46098 478 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 RGRP47804 291 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 CTSCP53634 463 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 EIF5AP63241 154 aaKnown RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 SIM1P81133 766 aaPredicted RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 CSTF1Q05048 431 aaKnown RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 TRNP1Q6NT89 227 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 TMEM81Q6P7N7 255 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 ACOT4Q8N9L9 421 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 TMEM102Q8N9M5 508 aaPredicted RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 TRMT10AQ8TBZ6 339 aaKnown RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 CCDC107Q8WV48 283 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 PTERQ96BW5 349 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 PEX11GQ96HA9 241 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 AMDHD1Q96NU7 426 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 KCNK12Q9HB15 430 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 PARPBPQ9NWS1 579 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 LAMP5Q9UJQ1 280 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 UNC119BA6NIH7 251 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 ORC5O43913 435 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 SRFP11831 508 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 CD72P21854 359 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 HIST1H1TP22492 207 aaPredicted RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 HLCSP50747 726 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 ARL6IP1Q15041 203 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 AFMIDQ63HM1 303 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 HSDL2Q6YN16 418 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 SERPINA11Q86U17 422 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 LYSMD2Q8IV50 215 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 CCDC54Q8NEL0 328 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 FANK1Q8TC84 345 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 ZCCHC4Q9H5U6 513 aa6.31□□□□□ -1.4
PBX1-221ENST00000612123 CHMP1AQ9HD42 196 aaPredicted RBP6.31□□□□□ -1.4
PBX1-221ENST00000612123 ZNF275Q9NSD4 429 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms