RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 SDHAF3Q9NRP4 125 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 MED12LQ86YW9 2145 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 TRPC5OSA6NMA1 111 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 AHRRA9YTQ3 701 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 ANKRD28O15084 1053 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 OIP5O43482 229 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 IL2RAP01589 272 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 GSNP06396 782 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 UQCRC1P31930 480 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 S100A3P33764 101 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 CHI3L1P36222 383 aaPredicted RBP13.11□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF136P52737 540 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
HDDC2-204ENST00000608295 C21orf58P58505 322 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 B3GALT5-AS1P59052 145 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDDC2-204ENST00000608295 SMU1Q2TAY7 513 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 NHSL2Q5HYW2 709 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 RIPPLY2Q5TAB7 128 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 AAGABQ6PD74 315 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 C6orf120Q7Z4R8 191 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 CAMKMTQ7Z624 323 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 KIRREL3Q8IZU9 778 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 TMCO5AQ8N6Q1 288 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 PNPT1Q8TCS8 783 aaKnown RBP13.11□□□□□ -0.31
HDDC2-204ENST00000608295 PHOSPHO1Q8TCT1 267 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 RAB8BQ92930 207 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 C1GALT1C1Q96EU7 318 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 THOC1Q96FV9 657 aaKnown RBP13.11□□□□□ -0.31
HDDC2-204ENST00000608295 INPP5KQ9BT40 448 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 OR51I1Q9H343 314 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 DUSP22Q9NRW4 184 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 PCDHGB4Q9UN71 923 aa13.11□□□□□ -0.31
HDDC2-204ENST00000608295 OR2M5A3KFT3 312 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 RNASET2O00584 256 aaKnown RBP13.1□□□□□ -0.31
HDDC2-204ENST00000608295 HCRTR2O43614 444 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 CYP7B1O75881 506 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 NUDT14O95848 222 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 EPPINO95925 133 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 MATN1P21941 496 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 MSX1P28360 303 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 PTGER4P35408 488 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 CDKN2CP42773 168 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 CCR4P51679 360 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF41P51814 821 aaPredicted RBP13.1□□□□□ -0.31
HDDC2-204ENST00000608295 CLDN18P56856 261 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 TFF3Q07654 80 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 C17orf67Q0P5P2 114 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 FOXF2Q12947 444 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 GPR68Q15743 365 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 EXOSC6Q5RKV6 272 aaKnown RBP13.1□□□□□ -0.31
HDDC2-204ENST00000608295 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
HDDC2-204ENST00000608295 NSUN5P2Q63ZY6 315 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 OGFOD2Q6N063 350 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 HDXQ7Z353 690 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 C16orf62Q7Z3J2 963 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 P4HA3Q7Z4N8 544 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 GRAMD2AQ8IUY3 354 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 NATD1Q8N6N6 113 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 OR9I1Q8NGQ6 314 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 PSMA8Q8TAA3 256 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 RAB3IL1Q8TBN0 382 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 LRRC8CQ8TDW0 803 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 INTS12Q96CB8 462 aaKnown RBP13.1□□□□□ -0.31
HDDC2-204ENST00000608295 STACQ99469 402 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 SLC35A5Q9BS91 424 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF337Q9Y3M9 751 aa13.1□□□□□ -0.31
HDDC2-204ENST00000608295 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 CENPVL1A0A0U1RR11 272 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 HSPB2A8KAH6 182 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 ALG1L2C9J202 215 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 SASH3O75995 380 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 KRT16P08779 473 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 HOXD4P09016 255 aaPredicted RBP13.09□□□□□ -0.31
HDDC2-204ENST00000608295 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
HDDC2-204ENST00000608295 OR12D1P0DN82 309 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 PEPDP12955 493 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF708P17019 499 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 SLC18A1P54219 525 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 CLDN20P56880 219 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 SIRPAP78324 504 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF117Q03924 483 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 MYBPHQ13203 477 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 HSPB2Q16082 182 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 TIGD2Q4W5G0 525 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 ZCCHC12Q6PEW1 402 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF295-AS1Q8N0V1 137 aa13.09□□□□□ -0.31
HDDC2-204ENST00000608295 OR8J2Q8NGG1 315 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms