RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CALCOCO2Q13137 446 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 FASTKD3Q14CZ7 662 aaKnown RBP4.2□□□□□ -1.74
LINC00397-202ENST00000606785 TPSAB1Q15661 275 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 TMEM30BQ3MIR4 351 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 FAM74A3Q4VXF1 159 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 LINC00242Q5T6M2 205 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 SLX4IPQ5VYV7 408 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 TAS2R42Q7RTR8 314 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 C16orf62Q7Z3J2 963 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 HSD11B1LQ7Z5J1 315 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 VSTM4Q8IW00 320 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 PDCL2Q8N4E4 241 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 OR8J1Q8NGP2 316 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 FBXO32Q969P5 355 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 DNAJA3Q96EY1 480 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 C11orf24Q96F05 449 aaPredicted RBP4.2□□□□□ -1.74
LINC00397-202ENST00000606785 MTMR9Q96QG7 549 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 TMEM43Q9BTV4 400 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 RNF41Q9H4P4 317 aaPredicted RBP4.2□□□□□ -1.74
LINC00397-202ENST00000606785 C8orf33Q9H7E9 229 aaPredicted RBP4.2□□□□□ -1.74
LINC00397-202ENST00000606785 FN3KRPQ9HA64 309 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 PARVGQ9HBI0 331 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 DDX18Q9NVP1 670 aaKnown RBP4.2□□□□□ -1.74
LINC00397-202ENST00000606785 HYPKQ9NX55 129 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 PIPOXQ9P0Z9 390 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 CRLS1Q9UJA2 301 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 ANAPC7Q9UJX3 599 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 RPH3ALQ9UNE2 315 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 SALL1Q9NSC2 1324 aa4.2□□□□□ -1.74
LINC00397-202ENST00000606785 TRBV7-9A0A0J9YWB2 115 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 A0A1W2PNV4 684 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 MEX3AA1L020 520 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 C11orf98E9PRG8 122 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 NTN3O00634 580 aaPredicted RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TYROBPO43914 113 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TPST2O60704 377 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 JCHAINP01591 159 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SP1P08047 785 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 BCKDHAP12694 445 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 HSD17B1P14061 328 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 ZNF3P17036 446 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 POU3F4P49335 361 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 RIDAP52758 137 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 NDUFV3P56181 108 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 RPS6P62753 249 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 CCNA1P78396 465 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 EWSR1Q01844 656 aaKnown RBP eCLIP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 NCBP1Q09161 790 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 MESDQ14696 234 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 STK11Q15831 433 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 KCTD21Q4G0X4 260 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 ACER2Q5QJU3 275 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 C10orf120Q5SQS8 335 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SEL1L2Q5TEA6 688 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SCYL2Q6P3W7 929 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SASS6Q6UVJ0 657 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 Q6ZPB1 254 aaPredicted RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 CYS1Q717R9 158 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 CEACAM19Q7Z692 300 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 LRRC75A-AS1Q8N1F1 130 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 CLDN19Q8N6F1 224 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 ZNF491Q8N8L2 437 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 C9orf106Q8NAJ2 232 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 OR6C4Q8NGE1 309 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 FAM81AQ8TBF8 368 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 LRRC15Q8TF66 581 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 PIGCQ92535 297 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SLC35B4Q969S0 331 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 NT5C3BQ969T7 300 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 NTNG2Q96CW9 530 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 RAB3CQ96E17 227 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 WBP1Q96G27 269 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 COQ2Q96H96 371 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SH3YL1Q96HL8 342 aaPredicted RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TPD52L3Q96J77 140 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 DUX3Q96PT4 197 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 NPAS2Q99743 824 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TMEM121Q9BTD3 319 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SPZ1Q9BXG8 430 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TRIM9Q9C026 710 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 MAGT1Q9H0U3 335 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 GLT8D2Q9H1C3 349 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 POLR3FQ9H1D9 316 aaPredicted RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 UPF3AQ9H1J1 476 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 FKBP14Q9NWM8 211 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 BARHL2Q9NY43 387 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 THEGQ9P2T0 379 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 MTRF1LQ9UGC7 380 aaKnown RBP4.19□□□□□ -1.74
LINC00397-202ENST00000606785 ATPIF1Q9UII2 106 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 SPATA2Q9UM82 520 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TMED5Q9Y3A6 229 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 AUP1Q9Y679 476 aa4.19□□□□□ -1.74
LINC00397-202ENST00000606785 TRAV26-1A0A087WT03 109 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 GOLGA6L10A6NI86 522 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 PCP4L1A6NKN8 68 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 IFITM10A6NMD0 228 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 PDHXO00330 501 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 NDUFAB1O14561 156 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 YKT6O15498 198 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms