RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PLEKHM3Q6ZWE6 761 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 GRAMD2AQ8IUY3 354 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF614Q8N883 585 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 MR1Q95460 341 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 POLR2J2Q9GZM3 115 aaKnown RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 POLR2J3Q9H1A7 115 aaKnown RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 NCDNQ9UBB6 729 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 NDRG4Q9ULP0 352 aaKnown RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 PCDHGA1Q9Y5H4 931 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ADAP00813 363 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 POU2F1P14859 743 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 EPHA2P29317 976 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 CLK3P49761 638 aaKnown RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 FAM199XQ6PEV8 388 aaPredicted RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF786Q8N393 782 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 PARP8Q8N3A8 854 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 B3GNT7Q8NFL0 401 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 OR4C3Q8NH37 302 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 SLC38A4Q969I6 547 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 GTPBP3Q969Y2 492 aaKnown RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 LMF1Q96S06 567 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 PRRX2Q99811 253 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 WWTR1Q9GZV5 400 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 HOXD1Q9GZZ0 328 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 PARD6AQ9NPB6 346 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ENOPH1Q9UHY7 261 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 B3GALT1Q9Y5Z6 326 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 SAGE2PA6NJ88 616 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 E9PQ18 207 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 TO15178 435 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 FMO6PO60774 539 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 GKN3PP0CG01 181 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 PRG2P13727 222 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 RYKP34925 604 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 RNF144AP50876 292 aaPredicted RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 RPP38P78345 283 aaKnown RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 FGFBP1Q14512 234 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 TMEM205Q6UW68 189 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF517Q6ZMY9 492 aaPredicted RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 RAB11FIP2Q7L804 512 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 CMIPQ8IY22 773 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 C17orf47Q8NEP4 570 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 NFAM1Q8NET5 270 aaPredicted RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 PRSS33Q8NF86 280 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 OIT3Q8WWZ8 545 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 EFHD2Q96C19 240 aaPredicted RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 ZPBPQ9BS86 351 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 YTHDF1Q9BYJ9 559 aaKnown RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 SEMA4CQ9C0C4 833 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 ING2Q9H160 280 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 PPIEQ9UNP9 301 aaKnown RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 NTNG1Q9Y2I2 539 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 GMPPBQ9Y5P6 360 aa19.91■□□□□ 0.78
USP6NL-204ENST00000606752 COL27A1Q8IZC6 1860 aaPredicted RBP19.91■□□□□ 0.78
USP6NL-204ENST00000606752 C9J4A7 227 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 BCAS1O75363 584 aaPredicted RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 ETV5P41161 510 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 ISL1P61371 349 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 PLAURQ03405 335 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 RAPSNQ13702 412 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 PGBD2Q6P3X8 592 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 CPEB2Q7Z5Q1 589 aaKnown RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 SETD9Q8NE22 299 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 TOR1AIP2Q8NFQ8 470 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 OR4K5Q8NGD3 323 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 CNOT9Q92600 299 aaKnown RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 LIN37Q96GY3 246 aaPredicted RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 SLC41A3Q96GZ6 507 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 DGCR6LQ9BY27 220 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 UBQLN4Q9NRR5 601 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 C19orf25Q9UFG5 118 aaPredicted RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 NR0B1P51843 470 aaKnown RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 PAPD4Q6PIY7 484 aaKnown RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 SLC35B4Q969S0 331 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 HRASLS5Q96KN8 279 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 LPAR4Q99677 370 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 PITX2Q99697 317 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 APOL4Q9BPW4 351 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 MESP1Q9BRJ9 268 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 NRSN2Q9GZP1 204 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 TESQ9UGI8 421 aaKnown RBP19.9■□□□□ 0.78
USP6NL-204ENST00000606752 HSPE1-MOB4S4R3N1 261 aa19.9■□□□□ 0.78
USP6NL-204ENST00000606752 A0A087WUU8 490 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 THY1P04216 161 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 LCN1P31025 176 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 UGT2B15P54855 530 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 TARDBPQ13148 414 aaKnown RBP eCLIP19.89■□□□□ 0.77
USP6NL-204ENST00000606752 KCTD21Q4G0X4 260 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 KLHL26Q53HC5 615 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 KLHL17Q6TDP4 642 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 FAM198BQ6UWH4 519 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 GDF7Q7Z4P5 450 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF441Q8N8Z8 693 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 GALNT6Q8NCL4 622 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 APCDD1LQ8NCL9 501 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 HSPBAP1Q96EW2 488 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 TAAR9Q96RI9 348 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 WDR77Q9BQA1 342 aaPredicted RBP19.89■□□□□ 0.77
USP6NL-204ENST00000606752 UCK2Q9BZX2 261 aa19.89■□□□□ 0.77
USP6NL-204ENST00000606752 TOR4AQ9NXH8 423 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms