RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SHMT2P34897 504 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 AQP6Q13520 282 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 P2RY14Q15391 338 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MTX3Q5HYI7 312 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 RPL13AP3Q6NVV1 102 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 GLDNQ6ZMI3 551 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MRPL41Q8IXM3 137 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 EIF4E3Q8N5X7 224 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SNX33Q8WV41 574 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ADAMTS14Q8WXS8 1223 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 FKBP10Q96AY3 582 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MTERF3Q96E29 417 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CPB2Q96IY4 423 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 KREMEN1Q96MU8 473 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 LINC00052Q96N35 136 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 OR2A14Q96R47 310 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CDCA3Q99618 268 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 APOL2Q9BQE5 337 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SGPP1Q9BX95 441 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF768Q9H5H4 540 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ELOVL6Q9H5J4 265 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF334Q9HCZ1 680 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF639Q9UID6 485 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PKP3Q9Y446 797 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 V9GYQ6 96 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TJP1Q07157 1748 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SCN11AQ9UI33 1791 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TCRBV21S2A2A0A5A6 115 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SHISA3A0PJX4 238 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC22A23A1A5C7 686 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 HEPACAM2A8MVW5 462 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 G3V2T6 193 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 M0QYG6 137 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 KCNK1O00180 336 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TRIM24O15164 1050 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 GRID2O43424 1007 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PRKAB2O43741 272 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TYROBPO43914 113 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 NME2P1O60361 137 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SEC24AO95486 1093 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 RNH1P13489 461 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 XRCC1P18887 633 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ATP5A1P25705 553 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 HLA-DMAP28067 261 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 EPHA3P29320 983 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PPP2R1BP30154 601 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TGFBR2P37173 567 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 NAA10P41227 235 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PKNOX1P55347 436 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 POU4F1Q01851 419 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNHIT3Q15649 155 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CHI3L2Q15782 390 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 MICBQ29980 383 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 MROH9Q5TGP6 573 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 LAMTOR1Q6IAA8 161 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SPESP1Q6UW49 350 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CHSY1Q86X52 802 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 C1orf52Q8N6N3 182 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ARNTL2Q8WYA1 636 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 IGSF21Q96ID5 467 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TEPSINQ96N21 525 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 FANCD2OSQ96PS1 177 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 FYTTD1Q96QD9 318 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SPATC1LQ9H0A9 340 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TRABDQ9H4I3 376 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 DDX31Q9H8H2 851 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 MANSC1Q9H8J5 431 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 HHATLQ9HCP6 504 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CD320Q9NPF0 282 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TREX1Q9NSU2 369 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TMEM161AQ9NX61 479 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 HCN3Q9P1Z3 774 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 MRM2Q9UI43 246 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 KIF25Q9UIL4 384 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PRPF19Q9UMS4 504 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ADAMTS5Q9UNA0 930 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ALG5Q9Y673 324 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SIPA1L1O43166 1804 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 A0A0J9YYE9 177 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CDRT15L2A8MXV6 281 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ANKRD63C9JTQ0 380 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TMPRSS2O15393 492 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TDP2O95551 362 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PAK4O96013 591 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 IFNA7P01567 189 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TRBC1P01850 177 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 FTH1P02794 183 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 IGKV5-2P06315 115 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 GRPP07492 148 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 COX7A2P14406 83 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PNPLA4P41247 253 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 WASP42768 502 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 AP3S2P59780 193 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SLAMF1Q13291 335 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 MTM1Q13496 603 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SLBPQ14493 270 aaKnown RBP eCLIP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 GANABQ14697 944 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 NPY5RQ15761 445 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms