RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 B3GNT7Q8NFL0 401 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 PLCXD1Q9NUJ7 323 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 GPATCH2Q9NW75 528 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 PCDHGA7Q9Y5G6 932 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 C10orf71Q711Q0 1435 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 A0A1W2PS29 197 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 BCAS1O75363 584 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 RAB3DO95716 219 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 MT-ND4P03905 459 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 RAB6AP20340 208 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 PRPS1P60891 318 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 RPS27AP62979 156 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 UBA52P62987 128 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 IL13RA1P78552 427 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 EIF2B1Q14232 305 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 GALEQ14376 348 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 NSDHLQ15738 373 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 TATDN3Q17R31 274 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 C2orf76Q3KRA6 126 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 DNAJC22Q8N4W6 341 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 C12orf45Q8N5I9 185 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SCAMP4Q969E2 229 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 BMFQ96LC9 184 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 RDH14Q9HBH5 336 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ZNFX1Q9P2E3 1918 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 OR7A17O14581 309 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 HTR3BO95264 441 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 NIPAL3Q6P499 406 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 OR5L2Q8NGL0 311 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM19Q96HH6 336 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 MRI1Q9BV20 369 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 KIAA2026Q5HYC2 2103 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 MTMR11A4FU01 709 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 VEGFDO43915 354 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 NFATC4Q14934 902 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 EIF4HQ15056 248 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 PGM2L1Q6PCE3 622 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 CREB3L4Q8TEY5 395 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 FAM72CH0Y354 149 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 UPP1Q16831 310 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 FAM72AQ5TYM5 149 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 FAM72DQ6L9T8 149 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 FAM72BQ86X60 149 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 NPRL2Q8WTW4 380 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 C3orf49Q96BT1 292 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 INTS6Q9UL03 887 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 CAMTA1Q9Y6Y1 1673 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 D6RAR5 112 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ARSBP15848 533 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 HOXA9P31269 272 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ADARB1P78563 741 aaKnown RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ELOCQ15369 112 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF679Q8IYX0 411 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 MARCH4Q9P2E8 410 aaPredicted RBP9.09□□□□□ -0.95
CSMD1-217ENST00000602723 LOC285095A0A1B0GVY8 99 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 COCHO43405 550 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 RHOP08100 348 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 DOCK5Q9H7D0 1870 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 STMND1H3BQB6 276 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 FOXK1P85037 733 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SHC2P98077 582 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ZXDBP98169 803 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 RELAQ04206 551 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 TDGQ13569 410 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 GPR19Q15760 415 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 GPR155Q7Z3F1 870 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SLC7A13Q8TCU3 470 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 SNED1Q8TER0 1413 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 C5P01031 1676 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 TSPAN11A1L157 253 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 MEIOCA2RUB1 952 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 GPR17Q13304 367 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 GK3PQ14409 553 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 GRM2Q14416 872 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 NDUFAF5Q5TEU4 345 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF704Q6ZNC4 412 aaPredicted RBP9.09□□□□□ -0.96
CSMD1-217ENST00000602723 SYNPRQ8TBG9 265 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 NETO1Q8TDF5 533 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 RAB9BQ9NP90 201 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 HEBP1Q9NRV9 189 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 DNAJC15Q9Y5T4 150 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 ENPP4Q9Y6X5 453 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 KIF13BQ9NQT8 1826 aa9.09□□□□□ -0.96
CSMD1-217ENST00000602723 ITGB4P16144 1822 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 RAB3AP20336 220 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 GLO1Q04760 184 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 OR5D16Q8NGK9 328 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF578Q96N58 590 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 KIF25Q9UIL4 384 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 PHIPQ8WWQ0 1821 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SERPINA5P05154 406 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 ITGAMP11215 1152 aa9.08□□□□□ -0.96
CSMD1-217ENST00000602723 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
CSMD1-217ENST00000602723 SNX18Q96RF0 628 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms