RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 TIA1P31483 386 aaKnown RBP eCLIP16.26■□□□□ 0.19
IRF3-231ENST00000602190 HSD17B3P37058 310 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 PLTPP55058 493 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 LOXL1Q08397 574 aaPredicted RBP16.26■□□□□ 0.19
IRF3-231ENST00000602190 TRADDQ15628 312 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 TSNAXIP1Q2TAA8 658 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 PLPPR5Q32ZL2 321 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 ELOA3BQ3SY89 546 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 LGSNQ5TDP6 509 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 SPATA4Q8NEY3 305 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 KBTBD8Q8NFY9 601 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 ELOA3Q8NG57 546 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 POC1BQ8TC44 478 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 ROBO4Q8WZ75 1007 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 HSD17B8Q92506 261 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 ZBTB8AQ96BR9 441 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 APIPQ96GX9 242 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 ZNF382Q96SR6 550 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 NAPGQ99747 312 aaPredicted RBP16.26■□□□□ 0.19
IRF3-231ENST00000602190 PRRG4Q9BZD6 226 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 VPS11Q9H270 941 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 KCNF1Q9H3M0 494 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 ACSS3Q9H6R3 686 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 HHATLQ9HCP6 504 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 PFDN4Q9NQP4 134 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 GDF2Q9UK05 429 aaPredicted RBP16.26■□□□□ 0.19
IRF3-231ENST00000602190 GRID1Q9ULK0 1009 aa16.26■□□□□ 0.19
IRF3-231ENST00000602190 IGHV4-30-2A0A087WSY4 118 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 A0A1W2PP18 115 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 SHISA9B4DS77 424 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 SMIM24O75264 130 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 ESRRBO95718 433 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 PSMD4P55036 377 aaKnown RBP16.25■□□□□ 0.19
IRF3-231ENST00000602190 ZNF239Q16600 458 aaKnown RBP16.25■□□□□ 0.19
IRF3-231ENST00000602190 NRF1Q16656 503 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 TMEM249Q2WGJ8 235 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 GRAMD1BQ3KR37 738 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 C11orf71Q6IPW1 123 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 TDRPQ86YL5 185 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 ELP4Q96EB1 424 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 KLHDC3Q9BQ90 382 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 MRPL57Q9BQC6 102 aaKnown RBP16.25■□□□□ 0.19
IRF3-231ENST00000602190 POTEKPQ9BYX7 375 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 MRPL46Q9H2W6 279 aaKnown RBP16.25■□□□□ 0.19
IRF3-231ENST00000602190 NGBQ9NPG2 151 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 FBXO34Q9NWN3 711 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 MRTO4Q9UKD2 239 aaKnown RBP16.25■□□□□ 0.19
IRF3-231ENST00000602190 VDAC3Q9Y277 283 aa16.25■□□□□ 0.19
IRF3-231ENST00000602190 A0A1W2PRB8 838 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 CLOCKO15516 846 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 KRT6AP02538 564 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 KRT6BP04259 564 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 TSPAN8P19075 237 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 KRT6CP48668 564 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 CLK3P49761 638 aaKnown RBP16.24■□□□□ 0.19
IRF3-231ENST00000602190 HTR6P50406 440 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 CLCQ05315 142 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 BSPH1Q075Z2 132 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 P2RY6Q15077 328 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 RASA2Q15283 850 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 SH2D4BQ5SQS7 431 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 UBAP2Q5T6F2 1119 aaKnown RBP16.24■□□□□ 0.19
IRF3-231ENST00000602190 CPTPQ5TA50 214 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 TRABD2AQ86V40 505 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 FAM110BQ8TC76 370 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 TNFRSF13CQ96RJ3 184 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 TBL1XR1Q9BZK7 514 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 GLIPR2Q9H4G4 154 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 MED17Q9NVC6 651 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 KLHL13Q9P2N7 655 aa16.24■□□□□ 0.19
IRF3-231ENST00000602190 TNFSF11O14788 317 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 NKX2-2O95096 273 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 SYNGR4O95473 234 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 OXSR1O95747 527 aaPredicted RBP16.23■□□□□ 0.19
IRF3-231ENST00000602190 JUNP05412 331 aaKnown RBP16.23■□□□□ 0.19
IRF3-231ENST00000602190 ACSM2AQ08AH3 577 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 TSC22D1Q15714 1073 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 EXOSC6Q5RKV6 272 aaKnown RBP16.23■□□□□ 0.19
IRF3-231ENST00000602190 ACSM2BQ68CK6 577 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 GTF2IRD2BQ6EKJ0 949 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 FAM71E1Q6IPT2 247 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 TMEM107Q6UX40 140 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 NUFIP2Q7Z417 695 aaKnown RBP16.23■□□□□ 0.19
IRF3-231ENST00000602190 GTF2IRD2Q86UP8 949 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 CCDC25Q86WR0 208 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 CDYL2Q8N8U2 506 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 OR4C3Q8NH37 302 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 ABHD3Q8WU67 409 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 KLHL15Q96M94 604 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 RNF145Q96MT1 663 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 AMDHD1Q96NU7 426 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 C12orf49Q9H741 205 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 SENP1Q9P0U3 644 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 NTMQ9P121 344 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 DMGDHQ9UI17 866 aaKnown RBP16.23■□□□□ 0.19
IRF3-231ENST00000602190 ING1Q9UK53 422 aaPredicted RBP16.23■□□□□ 0.19
IRF3-231ENST00000602190 NFU1Q9UMS0 254 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 B3GALT5Q9Y2C3 310 aa16.23■□□□□ 0.19
IRF3-231ENST00000602190 GNG14A0A1W2PPG7 69 aa16.22■□□□□ 0.19
IRF3-231ENST00000602190 GXYLT2A0PJZ3 443 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms