RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 NTN4Q9HB63 628 aa20.78■□□□□ 0.92
IRF3-228ENST00000601291 RYDENQ9NUL5 291 aaKnown RBP20.78■□□□□ 0.92
IRF3-228ENST00000601291 KLK13Q9UKR3 277 aa20.78■□□□□ 0.92
IRF3-228ENST00000601291 OAZ3Q9UMX2 235 aa20.78■□□□□ 0.92
IRF3-228ENST00000601291 CEP250Q9BV73 2442 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 PEX1O43933 1283 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 ICOSLGO75144 302 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 OR2J2O76002 312 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 NADKO95544 446 aaPredicted RBP20.77■□□□□ 0.92
IRF3-228ENST00000601291 OXSR1O95747 527 aaPredicted RBP20.77■□□□□ 0.92
IRF3-228ENST00000601291 SERPINA7P05543 415 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 YAP1P46937 504 aaKnown RBP20.77■□□□□ 0.92
IRF3-228ENST00000601291 ARHGDIAP52565 204 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 SPIBQ01892 262 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 TBC1D25Q3MII6 688 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 KBTBD2Q8IY47 623 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 SVOPLQ8N434 492 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 SLC5A8Q8N695 610 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 ZBTB20Q9HC78 741 aaPredicted RBP20.77■□□□□ 0.92
IRF3-228ENST00000601291 SLC35A3Q9Y2D2 325 aa20.77■□□□□ 0.92
IRF3-228ENST00000601291 PTPRZ1P23471 2315 aaPredicted RBP20.77■□□□□ 0.92
IRF3-228ENST00000601291 SERINC4A6NH21 518 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 H3BNH8 94 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 AP3D1O14617 1153 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 CAPNS1P04632 268 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 NGFRP08138 427 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 RRM2P31350 389 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 KLHL26Q53HC5 615 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 RANBP3LQ86VV4 465 aaPredicted RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 RBM45Q8IUH3 476 aaKnown RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 ZDHHC13Q8IUH4 622 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 GRAMD2AQ8IUY3 354 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 NR4A3Q92570 626 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 WFDC6Q9BQY6 131 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 SAMHD1Q9Y3Z3 626 aaKnown RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 TESMINQ9Y4I5 508 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 WDFY3Q8IZQ1 3526 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 J3KTA2 159 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 FRS3O43559 492 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 UGT2B11O75310 529 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 CSTAP01040 98 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 ITGAMP11215 1152 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 DNAJA1P31689 397 aaKnown RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 IFNA8P32881 189 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 RNF144AP50876 292 aaPredicted RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 OR5K1Q8NHB7 308 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 SLC35B4Q969S0 331 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 TMCO6Q96DC7 493 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 RASL10BQ96S79 203 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 TACO1Q9BSH4 297 aaKnown RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 C8orf4Q9NR00 106 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 FLRT3Q9NZU0 649 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 YARS2Q9Y2Z4 477 aaKnown RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 U3KQV3 271 aa20.76■□□□□ 0.91
IRF3-228ENST00000601291 CNOT1A5YKK6 2376 aaKnown RBP20.76■□□□□ 0.91
IRF3-228ENST00000601291 ITGA10O75578 1167 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 ADH7P40394 386 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 CHAF1BQ13112 559 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 GK3PQ14409 553 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 GANABQ14697 944 aaKnown RBP20.75■□□□□ 0.91
IRF3-228ENST00000601291 NPTX1Q15818 432 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 ZBTB49Q6ZSB9 765 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 ZNF605Q86T29 641 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 VASH2Q86V25 355 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 PACS2Q86VP3 889 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 RPS19BP1Q86WX3 136 aaKnown RBP20.75■□□□□ 0.91
IRF3-228ENST00000601291 HIPK1Q86Z02 1210 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 PRRC1Q96M27 445 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 FER1L6-AS2Q96M78 137 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 EPYCQ99645 322 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 TBL1XR1Q9BZK7 514 aa20.75■□□□□ 0.91
IRF3-228ENST00000601291 A0A1W2PQD3 144 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 G3V2T6 193 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 FBXO45P0C2W1 286 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 ENDOUP21128 410 aaKnown RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 FPR1P21462 350 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 CLK3P49761 638 aaKnown RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 CDH12P55289 794 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 SMIM11AP58511 58 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 Q0VFX4 171 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 JMJD6Q6NYC1 403 aaPredicted RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 NUP54Q7Z3B4 507 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 EPHX4Q8IUS5 362 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 ARMC10Q8N2F6 343 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 CNOT9Q92600 299 aaKnown RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 CDCP1Q9H5V8 836 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 DNAJB12Q9NXW2 375 aaKnown RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 VNN3Q9NY84 501 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 TESQ9UGI8 421 aaKnown RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 ACAD8Q9UKU7 415 aa20.74■□□□□ 0.91
IRF3-228ENST00000601291 CNOT11Q9UKZ1 510 aaKnown RBP20.74■□□□□ 0.91
IRF3-228ENST00000601291 MASP2O00187 686 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 TNFRSF11BO00300 401 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 ZNF354AO60765 605 aaPredicted RBP20.73■□□□□ 0.91
IRF3-228ENST00000601291 GADD45GO95257 159 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 UBL4AP11441 157 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 EVI2BP34910 448 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 IST1P53990 364 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 FBXW4P57775 412 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 TAS2R41P59536 307 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms