RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 VPS26BQ4G0F5 336 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 LIPMQ5VYY2 423 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 ZAR1Q86SH2 424 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 KRTAP1-3Q8IUG1 177 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 DDIASQ8IXT1 998 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 LRRN4CLQ8ND94 238 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 OR2T11Q8NH01 316 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 OR4C3Q8NH37 302 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 EPS8L3Q8TE67 593 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 NPAS1Q99742 590 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 FBXO34Q9NWN3 711 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 EMC9Q9Y3B6 208 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 CCL27Q9Y4X3 112 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 DSCAMO60469 2012 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 TLDC2A0PJX2 215 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 TTC36A6NLP5 189 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 H3BQF6 201 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 H7C1Q1 480 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 TNFSF11O14788 317 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 CXCL13O43927 109 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 OXSR1O95747 527 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 CHEK2O96017 543 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 ALOX5P09917 674 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 FCGR2AP12318 317 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 SDC1P18827 310 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 KRT4P19013 534 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 CRHR1P34998 444 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 ZNF41P51814 821 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 SLC18A2Q05940 514 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 FGFBP1Q14512 234 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 KIAA0040Q15053 153 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 CCNJQ5T5M9 372 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 C22orf34Q6ZV56 151 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 SH2D5Q6ZV89 423 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 FAM214BQ7L5A3 538 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 GGNQ86UU5 652 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 WDR75Q8IWA0 830 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 METTL25Q8N6Q8 603 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 COX18Q8N8Q8 333 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 CDRT4Q8N9R6 151 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 SLC16A11Q8NCK7 471 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 OR10D3Q8NH80 312 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 PIGTQ969N2 578 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 ZBED6CLQ96FA7 236 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 Q96MF0 132 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 GATA5Q9BWX5 397 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 IQCGQ9H095 443 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 C12orf49Q9H741 205 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 GIMAP2Q9UG22 337 aa15.78■□□□□ 0.12
SHKBP1-223ENST00000600552 KCNK2O95069 426 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 NKX2-2O95096 273 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 CD8BP10966 210 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 FPR1P21462 350 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 DUSP5Q16690 384 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 RFTN2Q52LD8 501 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 Q6ZSR9 355 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 WFDC8Q8IUA0 241 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 ATP6V1C2Q8NEY4 427 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 AGR3Q8TD06 166 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 RNF145Q96MT1 663 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 MCTS1Q9ULC4 181 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 SNX8Q9Y5X2 465 aa15.77■□□□□ 0.12
SHKBP1-223ENST00000600552 VPS13CQ709C8 3753 aa15.77■□□□□ 0.11
SHKBP1-223ENST00000600552 ROS1P08922 2347 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 IGLV3-32A0A0A0MS00 114 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 A0A1W2PRB8 838 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 TMEM233B4DJY2 109 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 SCDO00767 359 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 LY6G6DO95868 133 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 SFTPDP35247 375 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 CPTPQ5TA50 214 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 HBMQ6B0K9 141 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 YTHDF3Q7Z739 585 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 CIARTQ8N365 385 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 ROBO4Q8WZ75 1007 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 MS4A4EQ96PG1 132 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 CCT7Q99832 543 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 KLHDC3Q9BQ90 382 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 TUBB1Q9H4B7 451 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 MED17Q9NVC6 651 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 GIN1Q9NXP7 522 aa15.76■□□□□ 0.11
SHKBP1-223ENST00000600552 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 A0A087WZY1 265 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 NPIPA5A0A0B4J1W7 369 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 ALG1L2C9J202 215 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 NPIPA7E9PJI5 369 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 TRIM13O60858 407 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 NUDT14O95848 222 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 NPIPA8P0DM63 369 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 NEFHP12036 1026 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 ME2P23368 584 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 PRPH2P23942 346 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 POU6F2P78424 691 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 PCLAFQ15004 111 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 TMEM44Q2T9K0 475 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 CTU2Q2VPK5 515 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 MFSD12Q6NUT3 480 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 OR6Y1Q8NGX8 325 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 OR6K3Q8NGY3 331 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 OR2V1Q8NHB1 315 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms