RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 RFX3P48380 749 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 DGKQP52824 942 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 GFRA1P56159 465 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 TXNL4AP83876 142 aaKnown RBP14.69□□□□□ -0.06
LSM4-206ENST00000600289 TOMM20Q15388 145 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 DCST2Q5T1A1 773 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 C1orf185Q5T7R7 199 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 RTL6Q6ICC9 239 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 APOOLQ6UXV4 268 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 ZAR1Q86SH2 424 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 YRDCQ86U90 279 aaKnown RBP14.69□□□□□ -0.06
LSM4-206ENST00000600289 IFNEQ86WN2 208 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 ULK2Q8IYT8 1036 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 MIER2Q8N344 545 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 ARFGAP2Q8N6H7 521 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 TRIML2Q8N7C3 387 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 OR4K17Q8NGC6 315 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 OR5M9Q8NGP3 310 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 OR4C3Q8NH37 302 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 OIT3Q8WWZ8 545 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 OTUB1Q96FW1 271 aaPredicted RBP14.69□□□□□ -0.06
LSM4-206ENST00000600289 OR52E6Q96RD3 313 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 UGT2B28Q9BY64 529 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 HOXD1Q9GZZ0 328 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 TMEM45AQ9NWC5 275 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 FBXO34Q9NWN3 711 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 TAS2R10Q9NYW0 307 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 TNFRSF10DQ9UBN6 386 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 ITGB1BP2Q9UKP3 347 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 HCFC1P51610 2035 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 CACNA1CQ13936 2221 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 AHRRA9YTQ3 701 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 NPIPB9F8W1W9 429 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 ATP8B1O43520 1251 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 EDF1O60869 148 aaKnown RBP14.68□□□□□ -0.06
LSM4-206ENST00000600289 CPSF4O95639 269 aaKnown RBP14.68□□□□□ -0.06
LSM4-206ENST00000600289 CPN1P15169 458 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 CHMP24386 653 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 DPP4P27487 766 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 MSX1P28360 303 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 MAGEA8P43361 318 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 AQP5P55064 265 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 SF3B4Q15427 424 aaKnown RBP eCLIP14.68□□□□□ -0.06
LSM4-206ENST00000600289 GLYR1Q49A26 553 aaPredicted RBP14.68□□□□□ -0.06
LSM4-206ENST00000600289 CCNJQ5T5M9 372 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 SP5Q6BEB4 398 aaPredicted RBP14.68□□□□□ -0.06
LSM4-206ENST00000600289 HEPHL1Q6MZM0 1159 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 ZNF585AQ6P3V2 769 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 B3GNT6Q6ZMB0 384 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 C3P1Q6ZMU1 363 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 MTERF4Q7Z6M4 381 aaKnown RBP14.68□□□□□ -0.06
LSM4-206ENST00000600289 MARCH3Q86UD3 253 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 OR5D16Q8NGK9 328 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 OR14L1PQ8NHC6 308 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 ABTB1Q969K4 478 aaPredicted RBP14.68□□□□□ -0.06
LSM4-206ENST00000600289 CHMP6Q96FZ7 201 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 MARK4Q96L34 752 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 PANX1Q96RD7 426 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 EBF4Q9BQW3 602 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 TTYH2Q9BSA4 534 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 PTGES2Q9H7Z7 377 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 MED4Q9NPJ6 270 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 DKKL1Q9UK85 242 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 SLC6A5Q9Y345 797 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 KCNE3Q9Y6H6 103 aa14.68□□□□□ -0.06
LSM4-206ENST00000600289 UQCRHLA0A096LP55 91 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 FAM234BA2RU67 622 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 CCDC154A6NI56 674 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 C17orf51A8MQB3 221 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 FAM47E-STBD1D6RA91 191 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 LINC01387J3KSC0 135 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 SCDO00767 359 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ZIC3O60481 467 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ZCCHC18P0CG32 403 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 GLI4P10075 376 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ATP6V1C1P21283 382 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ATP4BP51164 291 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 B3GALT5-AS1P59052 145 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ARHGAP11BQ3KRB8 267 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 DCST1Q5T197 706 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 OR5M10Q6IEU7 315 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 AAGABQ6PD74 315 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ENPP6Q6UWR7 440 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 NCCRP1Q6ZVX7 275 aaPredicted RBP14.67□□□□□ -0.06
LSM4-206ENST00000600289 GALNT10Q86SR1 603 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 CLEC4FQ8N1N0 589 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 RPRMLQ8N4K4 120 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ZNF527Q8NB42 609 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 DUSP19Q8WTR2 217 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 ASB5Q8WWX0 329 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 RND1Q92730 232 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 C1GALT1C1Q96EU7 318 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 WDYHV1Q96HA8 205 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 SDF2Q99470 211 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 SLC35A5Q9BS91 424 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 NMUR2Q9GZQ4 415 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 DSN1Q9H410 356 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 POLE3Q9NRF9 147 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 EXD2Q9NVH0 621 aa14.67□□□□□ -0.06
LSM4-206ENST00000600289 COQ3Q9NZJ6 369 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms