RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FBXO34Q9NWN3 711 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 FAM120CQ9NX05 1096 aaKnown RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 CRIM1Q9NZV1 1036 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 ZNF629Q9UEG4 869 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 TMED5Q9Y3A6 229 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 SCAMP2O15127 329 aaKnown RBP12.44□□□□□ -0.42
SCAF1-203ENST00000598359 NKX2-2O95096 273 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 KCNH1O95259 989 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 TGM6O95932 706 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 LAMP1P11279 417 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 CAPN3P20807 821 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 HPCAL1P37235 193 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 KIR2DL3P43628 341 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 ASMTP46597 345 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-203ENST00000598359 STX3Q13277 289 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 DUSP5Q16690 384 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 C6orf136Q5SQH8 315 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 IL23RQ5VWK5 629 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 RAET1LQ5VY80 246 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 ADGRE4PQ86SQ3 457 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 GATSQ8NAP1 163 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 FNDC5Q8NAU1 212 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 OR4C3Q8NH37 302 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 RFWD2Q8NHY2 731 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 RNASE6Q93091 150 aaKnown RBP12.44□□□□□ -0.42
SCAF1-203ENST00000598359 PPP3R2Q96LZ3 170 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 MS4A4EQ96PG1 132 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 TBL1XR1Q9BZK7 514 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 NPHS2Q9NP85 383 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 SIRT3Q9NTG7 399 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-203ENST00000598359 ACSS1Q9NUB1 689 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-203ENST00000598359 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 ATP6V1HQ9UI12 483 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 ABCG2Q9UNQ0 655 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 ZNF337Q9Y3M9 751 aa12.44□□□□□ -0.42
SCAF1-203ENST00000598359 FBN3Q75N90 2809 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 ANKHD1Q8IWZ3 2542 aaKnown RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 HRNRQ86YZ3 2850 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 TMEM114B3SHH9 223 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 SEC14L5O43304 696 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 EMC8O43402 210 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 HSPA4LO95757 839 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 ANGPTL1O95841 491 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 ZNF708P17019 499 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 CHMP24386 653 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 CLDN15P56746 228 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 NCALDP61601 193 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 PDCD2Q16342 344 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 ATP6AP1LQ52LC2 224 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 CCNJQ5T5M9 372 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 MFSD12Q6NUT3 480 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 R3HCC1LQ7Z5L2 792 aaKnown RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 LUZP2Q86TE4 346 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 GRAMD2AQ8IUY3 354 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 CDRT4Q8N9R6 151 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 CEP70Q8NHQ1 597 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 PPP1R14CQ8TAE6 165 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 SMPDL3BQ92485 455 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 JADE3Q92613 823 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 HOXB13Q92826 284 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 TUBGCP3Q96CW5 907 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 MTERF3Q96E29 417 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 FAM120BQ96EK7 910 aaKnown RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 KLHDC3Q9BQ90 382 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 GPATCH1Q9BRR8 931 aaKnown RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 C3orf14Q9HBI5 128 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 SDHAF3Q9NRP4 125 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 NTMQ9P121 344 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 MRTO4Q9UKD2 239 aaKnown RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 MRPS18CQ9Y3D5 142 aaKnown RBP12.43□□□□□ -0.42
SCAF1-203ENST00000598359 SNX8Q9Y5X2 465 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 DOCK7Q96N67 2140 aa12.43□□□□□ -0.42
SCAF1-203ENST00000598359 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 A0A1W2PRB8 838 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 OR2M5A3KFT3 312 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CFAP73A6NFT4 308 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 H3BML4 177 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CTAG2O75638 210 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 ATP5HO75947 161 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 KCNK2O95069 426 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 RCBTB2O95199 551 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 OXSR1O95747 527 aaPredicted RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 HMGN2P05204 90 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 IFI6P09912 130 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 MAPK1P28482 360 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 OPRM1P35372 400 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 SERPINB5P36952 375 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CLK3P49761 638 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 ARFIP2P53365 341 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 SUCLG1P53597 346 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 PSMD4P55036 377 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CLDN20P56880 219 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.429e-6■■□□□ 12.4
SCAF1-203ENST00000598359 LASP1Q14847 261 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 TESK1Q15569 626 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 FBXL19-AS1Q494R0 122 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 VPS26BQ4G0F5 336 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CPTPQ5TA50 214 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms