RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 HOMEZQ8IX15 550 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 SPATA3Q8NHX4 192 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 ZFP28Q8NHY6 868 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 ACTRT2Q8TDY3 377 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 REXO5Q96IC2 774 aaKnown RBP15.25■□□□□ 0.03
PNKP-210ENST00000597965 USB1Q9BQ65 265 aaKnown RBP15.25■□□□□ 0.03
PNKP-210ENST00000597965 MID1IP1Q9NPA3 183 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 VDAC3Q9Y277 283 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 TIMM22Q9Y584 194 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 C7orf72A4D263 438 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 C17orf51A8MQB3 221 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 ALG1L2C9J202 215 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 HS3ST1O14792 307 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 RSL1D1O76021 490 aaKnown RBP15.24■□□□□ 0.03
PNKP-210ENST00000597965 HSPA4LO95757 839 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 ABHD2P08910 425 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 PRPS2P11908 318 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 LCN1P31025 176 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 GPC1P35052 558 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 HTR6P50406 440 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 ATP5J2P56134 94 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 RAC1P63000 192 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 SLC29A2Q14542 456 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
PNKP-210ENST00000597965 STAC2Q6ZMT1 411 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 TRIM46Q7Z4K8 759 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 IFT20Q8IY31 132 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 GTPBP8Q8N3Z3 284 aaPredicted RBP15.24■□□□□ 0.03
PNKP-210ENST00000597965 CDRT4Q8N9R6 151 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 OR10D3Q8NH80 312 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.24■□□□□ 0.03
PNKP-210ENST00000597965 GPR151Q8TDV0 419 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 TRMT61AQ96FX7 289 aaKnown RBP15.24■□□□□ 0.03
PNKP-210ENST00000597965 TACO1Q9BSH4 297 aaKnown RBP15.24■□□□□ 0.03
PNKP-210ENST00000597965 ACTR6Q9GZN1 396 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 TIGARQ9NQ88 270 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 FLRT3Q9NZU0 649 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 DCDC2Q9UHG0 476 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 CSPG4Q6UVK1 2322 aa15.24■□□□□ 0.03
PNKP-210ENST00000597965 INAFM1C9JVW0 142 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 ADAMDEC1O15204 470 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 KLF4O43474 513 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 FESP07332 822 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 DDX5P17844 614 aaKnown RBP15.23■□□□□ 0.03
PNKP-210ENST00000597965 PSMB1P20618 241 aaKnown RBP15.23■□□□□ 0.03
PNKP-210ENST00000597965 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.23■□□□□ 0.03
PNKP-210ENST00000597965 GRAMD1BQ3KR37 738 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 CPTPQ5TA50 214 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 NOXRED1Q6NXP6 359 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 CCNYL1Q8N7R7 359 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 STEAP2Q8NFT2 490 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 OR6Y1Q8NGX8 325 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 IGFBPL1Q8WX77 278 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 PLPPR2Q96GM1 343 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 ZNF764Q96H86 408 aaPredicted RBP15.23■□□□□ 0.03
PNKP-210ENST00000597965 RTN4RQ9BZR6 473 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 ROS1P08922 2347 aa15.23■□□□□ 0.03
PNKP-210ENST00000597965 PCNX3Q9H6A9 2034 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 GJE1A6NN92 205 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 THBDP07204 575 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 EIF1P41567 113 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 SERPINB4P48594 390 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 RPS4XP62701 263 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 RNPS1Q15287 305 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 CFAP157Q5JU67 520 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 ZCCHC12Q6PEW1 402 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 TRMT10CQ7L0Y3 403 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 EIF1ADQ8N9N8 165 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 OR2V1Q8NHB1 315 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 AENQ8WTP8 325 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 ZBED6CLQ96FA7 236 aaPredicted RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 KCNA7Q96RP8 456 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 TMEM204Q9BSN7 226 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 GSTO2Q9H4Y5 243 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 ESRP2Q9H6T0 727 aaKnown RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 EQTNQ9NQ60 294 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 UBQLN4Q9NRR5 601 aa15.22■□□□□ 0.03
PNKP-210ENST00000597965 POLR3HQ9Y535 204 aaPredicted RBP15.22■□□□□ 0.03
PNKP-210ENST00000597965 KIAA1324LA8MWY0 1029 aaPredicted RBP15.21■□□□□ 0.03
PNKP-210ENST00000597965 SCDO00767 359 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 PDPK1O15530 556 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 GMFGO60234 142 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 SEC22BO75396 215 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 NKX2-2O95096 273 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 OXSR1O95747 527 aaPredicted RBP15.21■□□□□ 0.03
PNKP-210ENST00000597965 MYL2P10916 166 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 HSPB3Q12988 150 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 TMEM201Q5SNT2 666 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 HBMQ6B0K9 141 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 ADAM5Q6NVV9 412 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 C22orf34Q6ZV56 151 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 TRABD2AQ86V40 505 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 WFDC8Q8IUA0 241 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 SLC9A6Q92581 669 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 HOXB13Q92826 284 aaPredicted RBP15.21■□□□□ 0.03
PNKP-210ENST00000597965 CPNE4Q96A23 557 aaPredicted RBP15.21■□□□□ 0.03
PNKP-210ENST00000597965 ADGRG7Q96K78 797 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 MS4A4EQ96PG1 132 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 GP6Q9HCN6 339 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms