RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	PRRG4	Q9BZD6	226 aa		9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	TMEM185B	Q9H7F4	350 aa		9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	C3orf14	Q9HBI5	128 aa		9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	LRTM1	Q9HBL6	345 aa		9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	FBXO34	Q9NWN3	711 aa		9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	WBP11	Q9Y2W2	641 aa	Known RBP	9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	FIS1	Q9Y3D6	152 aa		9.44	□□□□□ -0.9
LSM4-205	ENST00000597776	RAI1	Q7Z5J4	1906 aa	Predicted RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	UQCRHL	A0A096LP55	91 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776		A0A1W2PRB8	838 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	SMIM23	A6NLE4	172 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	ALG1L2	C9J202	215 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	NPIPB8	E9PQR5	432 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776		H3BQF6	201 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	TNFSF11	O14788	317 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	NDUFB5	O43674	189 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CXCL13	O43927	109 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	SS18L1	O75177	396 aa	Predicted RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	KCNK2	O95069	426 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	NKX2-2	O95096	273 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	PLG	P00747	810 aa	Predicted RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	IFI6	P09912	130 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	UROS	P10746	265 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CPA3	P15088	417 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	ZNF17	P17021	662 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	SDC1	P18827	310 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	RNF144A	P50876	292 aa	Predicted RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CTBP2	P56545	445 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	SLC18A2	Q05940	514 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	DUSP5	Q16690	384 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CTU2	Q2VPK5	515 aa	Known RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	PLPPR5	Q32ZL2	321 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CCNJ	Q5T5M9	372 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	STAC2	Q6ZMT1	411 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	C20orf204	Q6ZNR8	217 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CEP112	Q8N8E3	955 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CCDC63	Q8NA47	563 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	SLC16A11	Q8NCK7	471 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	NUP43	Q8NFH3	380 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	OR6K3	Q8NGY3	331 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	PPCDC	Q96CD2	204 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	GIMAP5	Q96F15	307 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	C16orf58	Q96GQ5	468 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	ADGRG7	Q96K78	797 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	FCRL1	Q96LA6	429 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	MS4A4E	Q96PG1	132 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	CCT7	Q99832	543 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	TUBB1	Q9H4B7	451 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	REEP4	Q9H6H4	257 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	MED17	Q9NVC6	651 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	OXSM	Q9NWU1	459 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	C1orf109	Q9NX04	203 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	SH3BP4	Q9P0V3	963 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	BAIAP2L1	Q9UHR4	511 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	EMC9	Q9Y3B6	208 aa		9.43	□□□□□ -0.9
LSM4-205	ENST00000597776	ARID1A	O14497	2285 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776		A0A087WZY1	265 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776		A0A0J9YW62	118 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	TTC36	A6NLP5	189 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	FAM171A2	A8MVW0	826 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	SLC28A1	O00337	649 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	KLF4	O43474	513 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	RGS14	O43566	566 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	SYNGR4	O95473	234 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	PLAU	P00749	431 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	NGFR	P08138	427 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	LINC00032	P0C843	101 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	IL11	P20809	199 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	PRPH2	P23942	346 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	PSMA4	P25789	261 aa	Known RBP	9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	PCSK6	P29122	969 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	SHC1	P29353	583 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	CRHR1	P34998	444 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	PTH2R	P49190	550 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	MANF	P55145	182 aa	Known RBP	9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	RPL38	P63173	70 aa	Known RBP	9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	OCRL	Q01968	901 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	CD226	Q15762	336 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	CCDC153	Q494R4	210 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	VPS26B	Q4G0F5	336 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	RFTN2	Q52LD8	501 aa	Predicted RBP	9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	LIPM	Q5VYY2	423 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	MFSD12	Q6NUT3	480 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	PRSS57	Q6UWY2	283 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	ZNF704	Q6ZNC4	412 aa	Predicted RBP	9.42	□□□□□ -0.9
LSM4-205	ENST00000597776		Q6ZSR9	355 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	WFDC8	Q8IUA0	241 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	C10orf107	Q8IVU9	208 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	WDR75	Q8IWA0	830 aa	Known RBP	9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	CDRT4	Q8N9R6	151 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	LRRN4CL	Q8ND94	238 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	OR2V1	Q8NHB1	315 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	CEP70	Q8NHQ1	597 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	ZFP28	Q8NHY6	868 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	POC1B	Q8TC44	478 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	FAM110B	Q8TC76	370 aa		9.42	□□□□□ -0.9
LSM4-205	ENST00000597776	NUDT8	Q8WV74	236 aa		9.42	□□□□□ -0.9

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