RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PMPCAQ10713 525 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 SF3A3Q12874 501 aaKnown RBP eCLIP10.11□□□□□ -0.79
VRK3-210ENST00000596121 MAPK11Q15759 364 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 NDUFAF6Q330K2 333 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 TIGD2Q4W5G0 525 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 KLHL26Q53HC5 615 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 SLC2A7Q6PXP3 512 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 BLOC1S3Q6QNY0 202 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 ARSKQ6UWY0 536 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 PLXDC2Q6UX71 529 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 DNAJC14Q6Y2X3 702 aaPredicted RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 ZNF621Q6ZSS3 439 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 HMGN2P46Q86SG4 172 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 RNF130Q86XS8 419 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 CCDC71Q8IV32 467 aaPredicted RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 ULK2Q8IYT8 1036 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 OR4K17Q8NGC6 315 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 OR14L1PQ8NHC6 308 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 PNPT1Q8TCS8 783 aaKnown RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 GTF2H4Q92759 462 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 ABTB1Q969K4 478 aaPredicted RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 ZG16BQ96DA0 208 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 PANX1Q96RD7 426 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 TTYH2Q9BSA4 534 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 G6PC3Q9BUM1 346 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 TBL1XR1Q9BZK7 514 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 PRDM14Q9GZV8 571 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 ZNF385DQ9H6B1 395 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 UBQLN4Q9NRR5 601 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 SUCOQ9UBS9 1254 aaKnown RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 RPH3AQ9Y2J0 694 aaPredicted RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 MRPS18CQ9Y3D5 142 aaKnown RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 KIAA1549Q9HCM3 1950 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 C19orf84I3L1E1 186 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 BCAS1O75363 584 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 KRT16P08779 473 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 GP1BBP13224 206 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 HK1P19367 917 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 CAPN3P20807 821 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 LCN1P31025 176 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 DCTP40126 519 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 LHX2P50458 406 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 DSCR4P56555 118 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 CLDN15P56746 228 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 C17orf67Q0P5P2 114 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 MAPK14Q16539 360 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 TMEM44Q2T9K0 475 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 ARHGAP11BQ3KRB8 267 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 PAGE3Q5JUK9 113 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 C1orf185Q5T7R7 199 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 WLSQ5T9L3 541 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 AP1ARQ63HQ0 302 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 TYW3Q6IPR3 259 aaKnown RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 BHLHB9Q6PI77 547 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 CBLN3Q6UW01 205 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 RPTNQ6XPR3 784 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 MAMDC2Q7Z304 686 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 LSRQ86X29 649 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 MSRB3Q8IXL7 192 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 ZNF808Q8N4W9 903 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 ANKFN1Q8N957 763 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 ZFP90Q8TF47 636 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 XAGE5Q8WWM1 108 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 STON2Q8WXE9 905 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 ARSGQ96EG1 525 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 C1GALT1C1Q96EU7 318 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 AURKBQ96GD4 344 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 SH3YL1Q96HL8 342 aaPredicted RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 PAIP1Q9H074 479 aaKnown RBP10.1□□□□□ -0.79
VRK3-210ENST00000596121 SDHAF3Q9NRP4 125 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 FGFR1OP2Q9NVK5 253 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 SLC25A37Q9NYZ2 338 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 SLAMF8Q9P0V8 285 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 MKLN1Q9UL63 735 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 RNF6Q9Y252 685 aa10.1□□□□□ -0.79
VRK3-210ENST00000596121 UNC79Q9P2D8 2635 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 CENPEQ02224 2701 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 A0A0G2JND7 137 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 A0A0G2JNJ9 132 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 A0A1W2PQD3 144 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 H0YC42 278 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 RFXANKO14593 260 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ATP8B1O43520 1251 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 NDUFB5O43674 189 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 TNFRSF21O75509 655 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ACTL6AO96019 429 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ZCCHC18P0CG32 403 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 CPN1P15169 458 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 CHI3L1P36222 383 aaPredicted RBP10.09□□□□□ -0.79
VRK3-210ENST00000596121 CLK3P49761 638 aaKnown RBP10.09□□□□□ -0.79
VRK3-210ENST00000596121 ATP4BP51164 291 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ATP12AP54707 1039 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 TPD52P55327 224 aaPredicted RBP10.09□□□□□ -0.79
VRK3-210ENST00000596121 CLDN18P56856 261 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 PLAURQ03405 335 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ZNF117Q03924 483 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 RCAN2Q14206 197 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ZNF141Q15928 474 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 SYPL1Q16563 259 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ACSF3Q4G176 576 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms