RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 VNN3Q9NY84 501 aa13.56□□□□□ -0.24
SHKBP1-211ENST00000595945 SLC9A8Q9Y2E8 581 aa13.56□□□□□ -0.24
SHKBP1-211ENST00000595945 DTNAQ9Y4J8 743 aa13.56□□□□□ -0.24
SHKBP1-211ENST00000595945 MPDZO75970 2070 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 SERINC4A6NH21 518 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 M0R3H8 397 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 MASP2O00187 686 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 FADS1O60427 444 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ABCB7O75027 752 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ICOSLGO75144 302 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 UGT2B11O75310 529 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 SEMA7AO75326 666 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 BCAS1O75363 584 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 DNAJB5O75953 348 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 DIRAS1O95057 198 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 OXSR1O95747 527 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 FBXO45P0C2W1 286 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 IL12BP29460 328 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 KRT20P35900 424 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ADH7P40394 386 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ZNF136P52737 540 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 CLN3Q13286 438 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 EFR3AQ14156 821 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 DESI1Q6ICB0 168 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 FAM71CQ8NEG0 241 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 OR6T1Q8NGN1 323 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 SLC35B4Q969S0 331 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 DHRS1Q96LJ7 313 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ZNF347Q96SE7 839 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ADOQ96SZ5 270 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 BDH2Q9BUT1 245 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 KLHL28Q9NXS3 571 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
SHKBP1-211ENST00000595945 A0A1W2PQD3 144 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 ADAM10O14672 748 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 FFAR1O14842 300 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 PEX1O43933 1283 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 TPST2O60704 377 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 OR2J2O76002 312 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 RHCEP18577 417 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 PEX2P28328 305 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 MLF1P58340 268 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 APOOLQ6UXV4 268 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 NUP54Q7Z3B4 507 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 VASH2Q86V25 355 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 TSPYL5Q86VY4 417 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 EPHX4Q8IUS5 362 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 KBTBD2Q8IY47 623 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 POGLUT1Q8NBL1 392 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 VANGL1Q8TAA9 524 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 SLC22A8Q8TCC7 542 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 RASL10BQ96S79 203 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 PIP5K1AQ99755 562 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 SCNM1Q9BWG6 230 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 DNAJB12Q9NXW2 375 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-211ENST00000595945 ALG1L2C9J202 215 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 J3KTA2 159 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 FRS3O43559 492 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 HS6ST1O60243 411 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 MAN1A2O60476 641 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 WT1P19544 449 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 VHLP40337 213 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 LIMS1P48059 325 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 SRSF6Q13247 344 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 ZNF791Q3KP31 576 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 DCAF10Q5QP82 559 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 JMJD6Q6NYC1 403 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 DEF8Q6ZN54 512 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 RPS19BP1Q86WX3 136 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 ZNF527Q8NB42 609 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 ICA1LQ8NDH6 482 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 PIK3C3Q8NEB9 887 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 PSMF1Q92530 271 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 TTC9Q92623 222 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 SLC13A4Q9UKG4 626 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 A4GNTQ9UNA3 340 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 SLC35A3Q9Y2D2 325 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 YARS2Q9Y2Z4 477 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 MSRB2Q9Y3D2 182 aa13.53□□□□□ -0.24
SHKBP1-211ENST00000595945 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.24
SHKBP1-211ENST00000595945 SAC3D1A6NKF1 404 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 ADAMDEC1O15204 470 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 FMO6PO60774 539 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 ITGA10O75578 1167 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 SPINK2P20155 84 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 FPR1P21462 350 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 YAP1P46937 504 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 RNF144AP50876 292 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 HMGA2P52926 109 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 IST1P53990 364 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 RGS8P57771 180 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 FBXW4P57775 412 aa13.52□□□□□ -0.25
SHKBP1-211ENST00000595945 GK3PQ14409 553 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms