RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NAA20P61599 178 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 IRX1P78414 480 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 IFFO1Q0D2I5 559 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 PCLAFQ15004 111 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 ERCC6LQ2NKX8 1250 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 SLC48A1Q6P1K1 146 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 CLEC2AQ6UVW9 174 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 C12orf54Q6X4T0 127 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 ZNF525Q8N782 197 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 OR4K14Q8NGD5 310 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 OR6K3Q8NGY3 331 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 TMCO6Q96DC7 493 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 ADOQ96SZ5 270 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 BRINP2Q9C0B6 783 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 ADAM19Q9H013 955 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 DSN1Q9H410 356 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 ALG2Q9H553 416 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 GPR52Q9Y2T5 361 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 PLLPQ9Y342 182 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 EMC9Q9Y3B6 208 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 PCDHA9Q9Y5H5 950 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 C1orf226A1L170 272 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 SERTM1A2A2V5 107 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 OR2M5A3KFT3 312 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 CCDC151A5D8V7 595 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 ELOA3DA6NLF2 546 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 GUCY1B2O75343 617 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 PLGP00747 810 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 CPMP14384 443 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 HK1P19367 917 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 GAS1P54826 345 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 CTBP2P56545 445 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 DSCR4P56555 118 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 C21orf58P58505 322 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 TRA2BP62995 288 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 RAE1P78406 368 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 BSPH1Q075Z2 132 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 SGCBQ16585 318 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 ELOA3BQ3SY89 546 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 SPIN4Q56A73 249 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 LIPMQ5VYY2 423 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 MREGQ8N565 214 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 BANPQ8N9N5 519 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 ELOA3Q8NG57 546 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 OR4K17Q8NGC6 315 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 TM4SF18Q96CE8 201 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 APIPQ96GX9 242 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 PARD6BQ9BYG5 372 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 PRRG4Q9BZD6 226 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 ROPN1BQ9BZX4 212 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 TRIM2Q9C040 744 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 C12orf49Q9H741 205 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 ROPN1Q9HAT0 212 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 TNFRSF12AQ9NP84 129 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 CISD1Q9NZ45 108 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 MED11Q9P086 117 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 MCM8Q9UJA3 840 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 MID2Q9UJV3 735 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 CES1P1Q9UKY3 287 aa12.25□□□□□ -0.45
SHKBP1-208ENST00000595726 OR6C70A6NIJ9 312 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 SHISA8B8ZZ34 492 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 H3BQF6 201 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 ACOX3O15254 700 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 PCDH7O60245 1069 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 DYSFO75923 2080 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 CBX7O95931 251 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 PORP16435 677 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 PSMB1P20618 241 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 DRD5P21918 477 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 FEN1P39748 380 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 PPICP45877 212 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 DUSP2Q05923 314 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 TAB1Q15750 504 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 PRICKLE4Q2TBC4 344 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 TRMT12Q53H54 448 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 CFAP157Q5JU67 520 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 C6orf163Q5TEZ5 329 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 FAM180BQ6P0A1 224 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 MEX3DQ86XN8 651 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 C10orf107Q8IVU9 208 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 OR2M3Q8NG83 312 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 OR52R1Q8NGF1 315 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 CACNG6Q9BXT2 260 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 IQCGQ9H095 443 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 ANKRA2Q9H9E1 313 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 EML4Q9HC35 981 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 MAT2BQ9NZL9 334 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 ZNF639Q9UID6 485 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 RAB21Q9UL25 225 aa12.24□□□□□ -0.45
SHKBP1-208ENST00000595726 LOC100289279A0A1B0GTE1 492 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 TSPAN2O60636 221 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 SS18L1O75177 396 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 ERAL1O75616 437 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 OPN1LWP04000 364 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms