RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GATSQ8NAP1 163 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 NAXEQ8NCW5 288 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 OR4K17Q8NGC6 315 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 OR9I1Q8NGQ6 314 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 GOT1L1Q8NHS2 421 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 MIPOL1Q8TD10 442 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 ADAMTS15Q8TE58 950 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CKAP2Q8WWK9 683 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 RND1Q92730 232 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 C1GALT1C1Q96EU7 318 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CCDC115Q96NT0 180 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 EBF4Q9BQW3 602 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 INPP5KQ9BT40 448 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 TBL1XR1Q9BZK7 514 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 SDR39U1Q9NRG7 319 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 INTS9Q9NV88 658 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 Q9UFV3 132 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 BTNL2Q9UIR0 455 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 DKKL1Q9UK85 242 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 FAF1Q9UNN5 650 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CAMK2AQ9UQM7 478 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 RPH3AQ9Y2J0 694 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 A0A1W2PQD3 144 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 AHRRA9YTQ3 701 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 UBDO15205 165 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 EPPINO95925 133 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 KRT16P08779 473 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 HOXD4P09016 255 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 CPN1P15169 458 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF708P17019 499 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 MATN1P21941 496 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 UQCRC2P22695 453 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 CHRNB4P30926 498 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 PTGER4P35408 488 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 IDH3AP50213 366 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 RNF144AP50876 292 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 CLDN18P56856 261 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 TFF3Q07654 80 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 C17orf67Q0P5P2 114 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 FUT5Q11128 374 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 GSTA3Q16772 222 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 SP5Q6BEB4 398 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 ARSKQ6UWY0 536 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 PLXDC2Q6UX71 529 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 ACBD4Q8NC06 268 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 LILRB4Q8NHJ6 448 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 CA5BP1Q8WTZ4 195 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 NEURL3Q96EH8 262 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 CHMP6Q96FZ7 201 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 SLC35G5Q96KT7 338 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 OR52E6Q96RD3 313 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 NPAS1Q99742 590 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 UCK2Q9BZX2 261 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 SDHAF3Q9NRP4 125 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 UBQLN4Q9NRR5 601 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 SLC6A13Q9NSD5 602 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 COQ3Q9NZJ6 369 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 KCNE5Q9UJ90 142 aa9.95□□□□□ -0.82
SHKBP1-206ENST00000595523 SPG11Q96JI7 2443 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 CENPVL1A0A0U1RR11 272 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 OR2M5A3KFT3 312 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 PRAMEF27A3QJZ7 478 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 NKX2-6A6NCS4 301 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 FAM90A27PA6NNH2 459 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 SHISA8B8ZZ34 492 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 OIP5O43482 229 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 NDUFB5O43674 189 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 GMFGO60234 142 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 FCMRO60667 390 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 SLC22A3O75751 556 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 TGDSO95455 350 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 HK1P19367 917 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 CHMP24386 653 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 CEACAM8P31997 349 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 MRPL19P49406 292 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 CLK3P49761 638 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 AQP5P55064 265 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 CLDN15P56746 228 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 GANABQ14697 944 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 TMEM44Q2T9K0 475 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 KLHL26Q53HC5 615 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 RIPPLY2Q5TAB7 128 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 NSUN5P2Q63ZY6 315 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 HEPHL1Q6MZM0 1159 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 TNFAIP8L2Q6P589 184 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 BHLHB9Q6PI77 547 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 POMZP3Q6PJE2 187 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 PM20D2Q8IYS1 436 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 GLB1L3Q8NCI6 653 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 CHDHQ8NE62 594 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 VPS37AQ8NEZ2 397 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 TNIP2Q8NFZ5 429 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 OR5M1Q8NGP8 315 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 OR10Q1Q8NGQ4 319 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 ZPLD1Q8TCW7 415 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 DYDC1Q8WWB3 177 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 ASB5Q8WWX0 329 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 RAB8BQ92930 207 aa9.94□□□□□ -0.82
SHKBP1-206ENST00000595523 MAGEB18Q96M61 343 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms