RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 FBXL19-AS1Q494R0 122 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 AGBL2Q5U5Z8 902 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 SPATA19Q7Z5L4 167 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 ADGRE4PQ86SQ3 457 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 MGARPQ8TDB4 240 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 C16orf58Q96GQ5 468 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 TUBA1CQ9BQE3 449 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 SFXN3Q9BWM7 321 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 FLRT3Q9NZU0 649 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 MED11Q9P086 117 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 RPH3AQ9Y2J0 694 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 H3BNH8 94 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 SNNO75324 88 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 AGR2O95994 175 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 CAPN3P20807 821 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 BMP5P22003 454 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 DGKQP52824 942 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 CLDN18P56856 261 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 HBA1P69905 142 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 OCRLQ01968 901 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 OR2A2Q6IF42 318 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 FIGNL1Q6PIW4 674 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 MTERF4Q7Z6M4 381 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 ACTRT2Q8TDY3 377 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 CDS1Q92903 461 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 YIPF4Q9BSR8 244 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 PNPOQ9NVS9 261 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 GPATCH2Q9NW75 528 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 PKDREJQ9NTG1 2253 aa16.06■□□□□ 0.16
SHKBP1-204ENST00000594862 PRSS51A0A1B0GVH4 220 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 C7orf72A4D263 438 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 CLCA1A8K7I4 914 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 KLF11O14901 512 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 HCRTR2O43614 444 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 TMIGD3P0DMS9 266 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 ZNF41P51814 821 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 B3GALT5-AS1P59052 145 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 SRYQ05066 204 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 DCST2Q5T1A1 773 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 OR4F3Q6IEY1 312 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 GRAMD2AQ8IUY3 354 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 LIX1LQ8IVB5 337 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 ZNF295-AS1Q8N0V1 137 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 NAXEQ8NCW5 288 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 OR4C3Q8NH37 302 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 RNASE6Q93091 150 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 ZBTB8AQ96BR9 441 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 MANSC1Q9H8J5 431 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 MCCC2Q9HCC0 563 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 CLCF1Q9UBD9 225 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 AP4B1Q9Y6B7 739 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 POLQO75417 2590 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 OTOGQ6ZRI0 2925 aa16.05■□□□□ 0.16
SHKBP1-204ENST00000594862 RNF103-CHMP3A0A140T963 221 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 OR2M5A3KFT3 312 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 E9PBE3 544 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 SYT5O00445 386 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 SDHDO14521 159 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 RCBTB2O95199 551 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 CRHP06850 196 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 ZNF136P52737 540 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 SUMO3P55854 103 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 RPS3AP61247 264 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 TLE4Q04727 773 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 MYBPHQ13203 477 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 FGFBP1Q14512 234 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 APOOLQ6UXV4 268 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 KIF18BQ86Y91 864 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 RELL2Q8NC24 303 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 OR4A15Q8NGL6 344 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 OIT3Q8WWZ8 545 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 SLC35G5Q96KT7 338 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 LURAP1Q96LR2 239 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 ZBTB18Q99592 522 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 ZNF559Q9BR84 538 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 RTN4RQ9BZR6 473 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 PIGMQ9H3S5 423 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 EXD2Q9NVH0 621 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 AIG1Q9NVV5 245 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 ZNF175Q9Y473 711 aa16.04■□□□□ 0.16
SHKBP1-204ENST00000594862 CSMD2Q7Z408 3487 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 B4DXG7 233 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 ANKRD28O15084 1053 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 FCGR2AP12318 317 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 TCEA1P23193 301 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 UQCRC1P31930 480 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 S100A3P33764 101 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 STARP49675 285 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 TXNL4AP83876 142 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 CCNJQ5T5M9 372 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 ARSKQ6UWY0 536 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 P4HA3Q7Z4N8 544 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 GALNT10Q86SR1 603 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 CLECL1Q8IZS7 167 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 TRIML2Q8N7C3 387 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 GOLGA6L1Q8N7Z2 621 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 C9orf106Q8NAJ2 232 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 GLB1L3Q8NCI6 653 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 OR5AK3PQ8NH89 298 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms