RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TXNDC16Q9P2K2 825 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ATXN10Q9UBB4 475 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 UXTQ9UBK9 157 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 CHMP2BQ9UQN3 213 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ENTPD4Q9Y227 616 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 BZW2Q9Y6E2 419 aaKnown RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 R4GN57 208 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 CHD9Q3L8U1 2897 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 A0A1W2PP64 1363 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 MBLAC1A4D2B0 266 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ANKDD1BA6NHY2 528 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 MSGN1A6NI15 193 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 A8MUI8 341 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 AP5Z1O43299 807 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CDH16O75309 829 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 VPS26AO75436 327 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 RPS6KA5O75582 802 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 MYO1DO94832 1006 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 SORBS2O94875 1100 aaKnown RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 SNAI1O95863 264 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 GLAP06280 429 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 MYL6BP14649 208 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 PTNP21246 168 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 AKT2P31751 481 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 RORAP35398 523 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 SLC1A3P43003 542 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 VBP1P61758 197 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ARHGAP1Q07960 439 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 RASGEF1BQ0VAM2 473 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 MAPK6Q16659 721 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 SMUG1Q53HV7 270 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF311Q5JNZ3 666 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 HHATQ5VTY9 493 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 LRRC66Q68CR7 880 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 BLOC1S2Q6QNY1 142 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF497Q6ZNH5 498 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 STXBP4Q6ZWJ1 553 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 PIGWQ7Z7B1 504 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ECHDC2Q86YB7 292 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 BCORP1Q8N888 145 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 BMPERQ8N8U9 685 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 NOA1Q8NC60 698 aaKnown RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 C17orf47Q8NEP4 570 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CDC26Q8NHZ8 85 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF461Q8TAF7 563 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 PROX1Q92786 737 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ULK4Q96C45 1275 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CHMP6Q96FZ7 201 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CDKN2AIPNLQ96HQ2 116 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ELMO2Q96JJ3 720 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 LINC00479Q96M42 142 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CCDC3Q9BQI4 270 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ACBD6Q9BR61 282 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 DGCR6LQ9BY27 220 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 SLC2A11Q9BYW1 496 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 OR52A5Q9H2C5 316 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 RHBGQ9H310 441 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 FN3KQ9H479 309 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 TMEM231Q9H6L2 316 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ROPN1Q9HAT0 212 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 MAN2C1Q9NTJ4 1040 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CNOT2Q9NZN8 540 aaKnown RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 HMGXB4Q9UGU5 601 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 CRLS1Q9UJA2 301 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ERVK-19Q9WJR5 959 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 FOXA2Q9Y261 457 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-216ENST00000593223 PPP2R2CQ9Y2T4 447 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
SMAD4-216ENST00000593223 SF3B1O75533 1304 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 KIAA1217Q5T5P2 1943 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 SCN7AQ01118 1682 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 FAM186AA6NE01 2351 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 MACROD2A1Z1Q3 448 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GABRR3A8MPY1 467 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 NTN3O00634 580 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF208O43345 1280 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 NME6O75414 186 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 KHDRBS3O75525 346 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ATP5HO75947 161 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 NXPH2O95156 264 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GAS8O95995 478 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 CSN3P07498 182 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 PLEKP08567 350 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 STAG3L2P0CL84 134 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 EPCAMP16422 314 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 UGT1A6P19224 532 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 RPS12P25398 132 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 MSNP26038 577 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 CHI3L1P36222 383 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ATP5C1P36542 298 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 IER3P46695 156 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 VAMP7P51809 220 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 CNN1P51911 297 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 PAX9P55771 341 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GSDMDP57764 484 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 CACNG1Q06432 222 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 SLC39A6Q13433 755 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 FCN2Q15485 313 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 NPTX1Q15818 432 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms