RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SHISA8B8ZZ34 492 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 HOXD4P09016 255 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-212ENST00000590260 CHRNB4P30926 498 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 CEACAM8P31997 349 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-212ENST00000590260 CLNS1AP54105 237 aaKnown RBP16.5■□□□□ 0.23
DDX39A-212ENST00000590260 FUT5Q11128 374 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 PDCD4Q53EL6 469 aaKnown RBP16.5■□□□□ 0.23
DDX39A-212ENST00000590260 RIPPLY2Q5TAB7 128 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 NXNQ6DKJ4 435 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 ARSKQ6UWY0 536 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 IFNEQ86WN2 208 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 OR9I1Q8NGQ6 314 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 MIPOL1Q8TD10 442 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 ADAMTS15Q8TE58 950 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF524Q96C55 264 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 TUBA1CQ9BQE3 449 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 TBL1XR1Q9BZK7 514 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 COQ3Q9NZJ6 369 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 DKKL1Q9UK85 242 aa16.5■□□□□ 0.23
DDX39A-212ENST00000590260 FAM90A27PA6NNH2 459 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 H0YC42 278 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 GMFGO60234 142 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 PGRP06401 933 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 CD1EP15812 388 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF708P17019 499 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 IGFBP2P18065 325 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 MATN1P21941 496 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 UQCRC2P22695 453 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 S100A3P33764 101 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 TPD52P55327 224 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-212ENST00000590260 DPY19L1Q2PZI1 675 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 ANXA8L1Q5VT79 327 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 RELL2Q8NC24 303 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-212ENST00000590260 CHDHQ8NE62 594 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-212ENST00000590260 LRRC8CQ8TDW0 803 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 CA5BP1Q8WTZ4 195 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 CKAP2Q8WWK9 683 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 ASB5Q8WWX0 329 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 CHMP6Q96FZ7 201 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 SLC35G5Q96KT7 338 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 SDF2Q99470 211 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 TREX2Q9BQ50 279 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-212ENST00000590260 OR51I1Q9H343 314 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 SDR39U1Q9NRG7 319 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-212ENST00000590260 SDHAF3Q9NRP4 125 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 UBQLN4Q9NRR5 601 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 BTNL2Q9UIR0 455 aa16.49■□□□□ 0.23
DDX39A-212ENST00000590260 FAF1Q9UNN5 650 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-212ENST00000590260 A0A1W2PQD3 144 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 OR2M5A3KFT3 312 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 MBD3L4A6NDZ8 208 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-212ENST00000590260 MBD3L3A6NE82 208 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-212ENST00000590260 MBD3L5A6NJ08 208 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-212ENST00000590260 FCMRO60667 390 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 DIAPH2O60879 1101 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 HK1P19367 917 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 CHMP24386 653 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 LCN1P31025 176 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 PTGER4P35408 488 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 IDH3AP50213 366 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 C17orf67Q0P5P2 114 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 KLHL26Q53HC5 615 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 NSUN5P2Q63ZY6 315 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 HEPHL1Q6MZM0 1159 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 PM20D2Q8IYS1 436 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 C9orf106Q8NAJ2 232 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 OR10Q1Q8NGQ4 319 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 MBD3L2Q8NHZ7 208 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-212ENST00000590260 ZPLD1Q8TCW7 415 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 MARVELD3Q96A59 401 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 NEURL3Q96EH8 262 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 SFXN2Q96NB2 322 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 TRIB1Q96RU8 372 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 ENKD1Q9H0I2 346 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF337Q9Y3M9 751 aa16.48■□□□□ 0.23
DDX39A-212ENST00000590260 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 NDUFB5O43674 189 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 GSNP06396 782 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 OR12D1P0DN82 309 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 IDO1P14902 403 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF136P52737 540 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 SUCLG1P53597 346 aaKnown RBP16.47■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF117Q03924 483 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 SRYQ05066 204 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 NDUFAF6Q330K2 333 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 CBLN3Q6UW01 205 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 LACC1Q8IV20 430 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF295-AS1Q8N0V1 137 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 POC1BQ8TC44 478 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 RAB8BQ92930 207 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 OR52E6Q96RD3 313 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 SLC35A5Q9BS91 424 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 INTS9Q9NV88 658 aaKnown RBP16.47■□□□□ 0.23
DDX39A-212ENST00000590260 CLCF1Q9UBD9 225 aa16.47■□□□□ 0.23
DDX39A-212ENST00000590260 CENPEQ02224 2701 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 UBDO15205 165 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 SLC22A3O75751 556 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 SNRPB2P08579 225 aaKnown RBP16.46■□□□□ 0.23
DDX39A-212ENST00000590260 KRT16P08779 473 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms