RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ZNF550Q7Z398 422 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 GALNT10Q86SR1 603 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 GGNQ86UU5 652 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 CXorf67Q86X51 503 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 P3H2Q8IVL5 708 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 WDR75Q8IWA0 830 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 C4orf33Q8N1A6 199 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 EIF1ADQ8N9N8 165 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 OR6Y1Q8NGX8 325 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 OR4C3Q8NH37 302 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 FBXO30Q8TB52 745 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 HOXB13Q92826 284 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 ZC3HAV1LQ96H79 300 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 MS4A4EQ96PG1 132 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 SMR3AQ99954 134 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 KLHL4Q9C0H6 718 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 ACSS1Q9NUB1 689 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 BAIAP2L1Q9UHR4 511 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 TMED5Q9Y3A6 229 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 DSCAMO60469 2012 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 HEATR5AQ86XA9 2040 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 SIAH2O43255 324 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 AQP8O94778 261 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 OXSR1O95747 527 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 NGFRP08138 427 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 ALOX5P09917 674 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 LINC00032P0C843 101 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 ASMTP46597 345 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 ZNF41P51814 821 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 CTBP2P56545 445 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 RPL38P63173 70 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 GUSBP1Q15486 140 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 EXOC3L2Q2M3D2 409 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 GALNTL6Q49A17 601 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 RFTN2Q52LD8 501 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 ZNF385BQ569K4 471 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 FIGNL1Q6PIW4 674 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 RNF165Q6ZSG1 346 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 KRTAP1-3Q8IUG1 177 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 GATSQ8NAP1 163 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 OR2T11Q8NH01 316 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 CLHC1Q8NHS4 586 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 EPS8L3Q8TE67 593 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 ZBTB8AQ96BR9 441 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 FCRL1Q96LA6 429 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 PIP5K1AQ99755 562 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 GATA5Q9BWX5 397 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 UBTD1Q9HAC8 227 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 PAQR5Q9NXK6 330 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 NTMQ9P121 344 aa16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 MCTS1Q9ULC4 181 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-211ENST00000590098 ROS1P08922 2347 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 SCDO00767 359 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 TRIM13O60858 407 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 KCNK2O95069 426 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 SYNGR4O95473 234 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 INHBBP09529 407 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 ACP2P11117 423 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 LCN1P31025 176 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 CCKARP32238 428 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 FRKP42685 505 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 SERPINB4P48594 390 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 SLC18A2Q05940 514 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 PDE7AQ13946 482 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 PCLAFQ15004 111 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 ACKR1Q16570 336 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 KANK2Q63ZY3 851 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 ANKRD34AQ69YU3 496 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 MFSD12Q6NUT3 480 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 ZCCHC12Q6PEW1 402 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 R3HCC1LQ7Z5L2 792 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 DDIASQ8IXT1 998 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 LRRC75A-AS1Q8N1F1 130 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 GTPBP8Q8N3Z3 284 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 COX18Q8N8Q8 333 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 SLC16A11Q8NCK7 471 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 OR6K3Q8NGY3 331 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 OR10D3Q8NH80 312 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 FAM110BQ8TC76 370 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 ACTRT2Q8TDY3 377 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 JADE3Q92613 823 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 CAVIN3Q969G5 261 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 MTERF3Q96E29 417 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 GIMAP5Q96F15 307 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 GMPPAQ96IJ6 420 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 CCL19Q99731 98 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 TUBB1Q9H4B7 451 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 ZNF395Q9H8N7 513 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 FANCFQ9NPI8 374 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 UBQLN4Q9NRR5 601 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 DNAJC15Q9Y5T4 150 aa16.1■□□□□ 0.17
PRKCSH-211ENST00000590098 LSM1O15116 133 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 HSPA4LO95757 839 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 ME2P23368 584 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 HPCAL1P37235 193 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 SLC6A8P48029 635 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 PRIM2P49643 509 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 RAC1P63000 192 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms