RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CCDC86Q9H6F5 360 aaKnown RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 COQ10BQ9H8M1 238 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 MMP25Q9NPA2 562 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ZMIZ1Q9ULJ6 1067 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 CHST2Q9Y4C5 530 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 TESMINQ9Y4I5 508 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 AK5Q9Y6K8 562 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 U3KQV3 271 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 IGF2RP11717 2491 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 EXPH5Q8NEV8 1989 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 CDHR4A6H8M9 788 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 G3V2T6 193 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 DXOO77932 396 aaKnown RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 UTS2O95399 124 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ICAM2P13598 275 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 RRM2P31350 389 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 RGS8P57771 180 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ZSWIM7Q19AV6 140 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 MRPL2Q5T653 305 aaKnown RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 IZUMO2Q6UXV1 221 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 DTX1Q86Y01 620 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 RBM45Q8IUH3 476 aaKnown RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 LACC1Q8IV20 430 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 OR6T1Q8NGN1 323 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 OR4C3Q8NH37 302 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 OR5K1Q8NHB7 308 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 OIT3Q8WWZ8 545 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 WFDC6Q9BQY6 131 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 GPN2Q9H9Y4 310 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 DKK4Q9UBT3 224 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 SAMHD1Q9Y3Z3 626 aaKnown RBP20.51■□□□□ 0.87
ATG4D-209ENST00000588857 WWP2O00308 870 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 TSPAN2O60636 221 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 HPP00738 406 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 DNAJA1P31689 397 aaKnown RBP20.5■□□□□ 0.87
ATG4D-209ENST00000588857 IST1P53990 364 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 PNLIPRP2P54317 469 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 SPIBQ01892 262 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 TCTN3Q6NUS6 607 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 EPHX4Q8IUS5 362 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 GALNT4Q8N4A0 578 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 CBR4Q8N4T8 237 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 EVA1AQ9H8M9 152 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 C8orf4Q9NR00 106 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 P4HTMQ9NXG6 502 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 MYOTQ9UBF9 498 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 FBXL4Q9UKA2 621 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 CNOT11Q9UKZ1 510 aaKnown RBP20.5■□□□□ 0.87
ATG4D-209ENST00000588857 NPFFR2Q9Y5X5 522 aa20.5■□□□□ 0.87
ATG4D-209ENST00000588857 J3KTA2 159 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 PDLIM1O00151 329 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 SCDO00767 359 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 FRS3O43559 492 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 ABCB7O75027 752 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 RNF144AP50876 292 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-209ENST00000588857 PPP1R8Q12972 351 aaKnown RBP20.49■□□□□ 0.87
ATG4D-209ENST00000588857 IL10RAQ13651 578 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 FGFBP1Q14512 234 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 C16orf47Q6ZP98 133 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-209ENST00000588857 MRGPREQ86SM8 312 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 STK32CQ86UX6 486 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 HIPK1Q86Z02 1210 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 CMIPQ8IY22 773 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 EPYCQ99645 322 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 VNN3Q9NY84 501 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 MRPS18BQ9Y676 258 aaKnown RBP20.49■□□□□ 0.87
ATG4D-209ENST00000588857 FREM2Q5SZK8 3169 aa20.49■□□□□ 0.87
ATG4D-209ENST00000588857 TMEM200CA6NKL6 621 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 TNFRSF11BO00300 401 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 AP3D1O14617 1153 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 LIPCP11150 499 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 CYP4B1P13584 511 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 TBXA2RP21731 343 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 CDH12P55289 794 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 GANABQ14697 944 aaKnown RBP20.48■□□□□ 0.87
ATG4D-209ENST00000588857 RTP5Q14D33 572 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 KLHL26Q53HC5 615 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 OTUD3Q5T2D3 398 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-209ENST00000588857 PPP4R4Q6NUP7 873 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 SHQ1Q6PI26 577 aaKnown RBP20.48■□□□□ 0.87
ATG4D-209ENST00000588857 PACRGLQ8N7B6 248 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 SLC22A8Q8TCC7 542 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 SLC29A1Q99808 456 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 IL17BQ9UHF5 180 aa20.48■□□□□ 0.87
ATG4D-209ENST00000588857 SERINC4A6NH21 518 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 OR6C70A6NIJ9 312 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 TAF4O00268 1085 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 SOCS2O14508 198 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 PPM1BO75688 479 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 RASAL1O95294 804 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 CELA2AP08217 269 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 ZNF26P17031 533 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-209ENST00000588857 FPR1P21462 350 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 EFR3AQ14156 821 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 NPTX1Q15818 432 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 TMEM179BQ7Z7N9 219 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 RANBP3LQ86VV4 465 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-209ENST00000588857 NR4A3Q92570 626 aa20.47■□□□□ 0.87
ATG4D-209ENST00000588857 NXPE2Q96DL1 559 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms