RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 MCTS1Q9ULC4 181 aaKnown RBP12.68□□□□□ -0.38
ERCC1-205ENST00000587888 PTGDR2Q9Y5Y4 395 aa12.68□□□□□ -0.38
ERCC1-205ENST00000587888 VPS13CQ709C8 3753 aa12.68□□□□□ -0.38
ERCC1-205ENST00000587888 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 INAFM1C9JVW0 142 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 TNFSF11O14788 317 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 PDPK1O15530 556 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 OXSR1O95747 527 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 FAM153BP0C7A2 387 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 PPP3CBP16298 524 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 MANFP55145 182 aaKnown RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 PPP2R2BQ00005 443 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 FAM153CQ494X1 144 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 VPS26BQ4G0F5 336 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 CPTPQ5TA50 214 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 ZNF704Q6ZNC4 412 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 FRMD7Q6ZUT3 714 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 SH2D5Q6ZV89 423 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 IKBIPQ70UQ0 350 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 LRRN4CLQ8ND94 238 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 TMEM171Q8WVE6 324 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 OSTF1Q92882 214 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 CAVIN3Q969G5 261 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 OTUB1Q96FW1 271 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 MDFIQ99750 246 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 GSX2Q9BZM3 304 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 C12orf65Q9H3J6 166 aaKnown RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 C12orf49Q9H741 205 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 TMEM185BQ9H7F4 350 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 SH3BP4Q9P0V3 963 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 PSMC3IPQ9P2W1 217 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-205ENST00000587888 BAIAP2L1Q9UHR4 511 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 FIS1Q9Y3D6 152 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 CCL27Q9Y4X3 112 aa12.67□□□□□ -0.38
ERCC1-205ENST00000587888 A0A087WZY1 265 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 A0A0J9YW62 118 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 A0A1W2PRB8 838 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ALG1L2C9J202 215 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 SS18L1O75177 396 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-205ENST00000587888 KCNK2O95069 426 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 NKX2-2O95096 273 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 PROCP04070 461 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 UROSP10746 265 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ACP2P11117 423 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 HPGDP15428 266 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ZNF17P17021 662 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 IL11P20809 199 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 EFNA1P20827 205 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-205ENST00000587888 CARD18P57730 90 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 RAC1P63000 192 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 HBMQ6B0K9 141 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 MFSD12Q6NUT3 480 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 BEND4Q6ZU67 534 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 STK32CQ86UX6 486 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 IFT20Q8IY31 132 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 GTPBP8Q8N3Z3 284 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-205ENST00000587888 CDRT4Q8N9R6 151 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 SLC16A11Q8NCK7 471 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 OR2V1Q8NHB1 315 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 CLHC1Q8NHS4 586 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ZFP28Q8NHY6 868 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 MZB1Q8WU39 189 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ROBO4Q8WZ75 1007 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 PPCDCQ96CD2 204 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 C16orf58Q96GQ5 468 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 RNF145Q96MT1 663 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 TSSK3Q96PN8 268 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 KLHDC3Q9BQ90 382 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 ACTR6Q9GZN1 396 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 IQCGQ9H095 443 aaKnown RBP12.66□□□□□ -0.38
ERCC1-205ENST00000587888 LRTM1Q9HBL6 345 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 FANCFQ9NPI8 374 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 MED17Q9NVC6 651 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 C1orf109Q9NX04 203 aa12.66□□□□□ -0.38
ERCC1-205ENST00000587888 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-205ENST00000587888 H3BQF6 201 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 SLC28A1O00337 649 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 RGS14O43566 566 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 GLRA3O75311 464 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 NTN1O95631 604 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 LINC00032P0C843 101 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 CPA3P15088 417 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 MAP3K8P41279 467 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 NR1H2P55055 460 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 DNAJB13P59910 316 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 NAA20P61599 178 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 TSC22D1Q15714 1073 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 DUSP5Q16690 384 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 ZNF385BQ569K4 471 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 PDSS1Q5T2R2 415 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 CCNJQ5T5M9 372 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms