RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 KLHL28Q9NXS3 571 aa16.89■□□□□ 0.29
TRIM47-205ENST00000587774 C6orf203Q9P0P8 240 aaPredicted RBP16.89■□□□□ 0.29
TRIM47-205ENST00000587774 GIMAP2Q9UG22 337 aa16.89■□□□□ 0.29
TRIM47-205ENST00000587774 AP4B1Q9Y6B7 739 aa16.89■□□□□ 0.29
TRIM47-205ENST00000587774 TLDC2A0PJX2 215 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 ALG1L2C9J202 215 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 CASKO14936 926 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 PIP5K1BO14986 540 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 EMC8O43402 210 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 KCNK2O95069 426 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 NGFRP08138 427 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 BCKDHAP12694 445 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 ZNF17P17021 662 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 CD53P19397 219 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 ASMTP46597 345 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 RPS3AP61247 264 aaKnown RBP16.88■□□□□ 0.29
TRIM47-205ENST00000587774 GUSBP1Q15486 140 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 UGT3A2Q3SY77 523 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 TRABD2AQ86V40 505 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 AGR3Q8TD06 166 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 TRIM44Q96DX7 344 aaPredicted RBP16.88■□□□□ 0.29
TRIM47-205ENST00000587774 WFIKKN1Q96NZ8 548 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 NPAS1Q99742 590 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 SIRT3Q9NTG7 399 aaPredicted RBP16.88■□□□□ 0.29
TRIM47-205ENST00000587774 FBXO34Q9NWN3 711 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 SLC17A7Q9P2U7 560 aa16.88■□□□□ 0.29
TRIM47-205ENST00000587774 EIF3LQ9Y262 564 aaKnown RBP16.88■□□□□ 0.29
TRIM47-205ENST00000587774 CTIFO43310 598 aaKnown RBP16.87■□□□□ 0.29
TRIM47-205ENST00000587774 NDUFB5O43674 189 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 NPHS1O60500 1241 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 AQP8O94778 261 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 CGAP01215 116 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 FGF4P08620 206 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 POU2F1P14859 743 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 TBXA2RP21731 343 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 UGT2B10P36537 528 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 HPCAL1P37235 193 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 PCYT1AP49585 367 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM47-205ENST00000587774 ARL13AQ5H913 290 aaPredicted RBP16.87■□□□□ 0.29
TRIM47-205ENST00000587774 ZCCHC23Q6ZST2 131 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 RIBC1Q8N443 379 aaPredicted RBP16.87■□□□□ 0.29
TRIM47-205ENST00000587774 WFDC11Q8NEX6 87 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM47-205ENST00000587774 JADE3Q92613 823 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 MTERF3Q96E29 417 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 FAM120BQ96EK7 910 aaKnown RBP16.87■□□□□ 0.29
TRIM47-205ENST00000587774 C16orf58Q96GQ5 468 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 ANKZF1Q9H8Y5 726 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 TRAF6Q9Y4K3 522 aa16.87■□□□□ 0.29
TRIM47-205ENST00000587774 DEFB108AA8MXU0 73 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 EIF1AYO14602 144 aaKnown RBP16.86■□□□□ 0.29
TRIM47-205ENST00000587774 SCAMP2O15127 329 aaKnown RBP16.86■□□□□ 0.29
TRIM47-205ENST00000587774 CD8BP10966 210 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 FCGR2AP12318 317 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 EIF1AXP47813 144 aaKnown RBP16.86■□□□□ 0.29
TRIM47-205ENST00000587774 OCRLQ01968 901 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 SGCBQ16585 318 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 PLPPR5Q32ZL2 321 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 XKR7Q5GH72 579 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 EXOSC6Q5RKV6 272 aaKnown RBP16.86■□□□□ 0.29
TRIM47-205ENST00000587774 CCNJQ5T5M9 372 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 PPP4R4Q6NUP7 873 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 ZNF550Q7Z398 422 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 KRTAP1-3Q8IUG1 177 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 COX18Q8N8Q8 333 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 OR6Y1Q8NGX8 325 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 POM121Q96HA1 1249 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 SH3YL1Q96HL8 342 aaPredicted RBP16.86■□□□□ 0.29
TRIM47-205ENST00000587774 KLHDC3Q9BQ90 382 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 MED18Q9BUE0 208 aa16.86■□□□□ 0.29
TRIM47-205ENST00000587774 ZCCHC3Q9NUD5 404 aaKnown RBP16.86■□□□□ 0.29
TRIM47-205ENST00000587774 TLN2Q9Y4G6 2542 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 A0A087WZY1 265 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 A0A1W2PRB8 838 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 SPAG7O75391 227 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ALOX5P09917 674 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 NUDT17P0C025 328 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ARRB2P32121 409 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 SLC6A8P48029 635 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 KCNJ5P48544 419 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 FGFBP1Q14512 234 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 PTGR1Q14914 329 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 MLC1Q15049 377 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 CTU2Q2VPK5 515 aaKnown RBP16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ZCCHC12Q6PEW1 402 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 FAM214BQ7L5A3 538 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 R3HCC1LQ7Z5L2 792 aaKnown RBP16.85■□□□□ 0.29
TRIM47-205ENST00000587774 GTPBP8Q8N3Z3 284 aaPredicted RBP16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ZNF610Q8N9Z0 462 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 OR7A2PQ8NGA2 310 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 CDS1Q92903 461 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ADGRG7Q96K78 797 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 RNF145Q96MT1 663 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 EML4Q9HC35 981 aaKnown RBP16.85■□□□□ 0.29
TRIM47-205ENST00000587774 UBQLN4Q9NRR5 601 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 MED17Q9NVC6 651 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ELOVL5Q9NYP7 299 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ZNF226Q9NYT6 803 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms