RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 DGCR6LQ9BY27 220 aa18.33■□□□□ 0.53
TRIM47-204ENST00000587339 EVA1AQ9H8M9 152 aa18.33■□□□□ 0.53
TRIM47-204ENST00000587339 FRG2CA6NGY1 282 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 VSTM2BA6NLU5 285 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 BCAS1O75363 584 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 NUBP1P53384 320 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 NR1H2P55055 460 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 NUP107P57740 925 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 DCAF7P61962 342 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 EBPQ15125 230 aaKnown RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 RRM2BQ7LG56 351 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 GDF7Q7Z4P5 450 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 CCDC71Q8IV32 467 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 OR4C3Q8NH37 302 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 ADIPOR1Q96A54 375 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 EFHD2Q96C19 240 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 LMF1Q96S06 567 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 CMKLR1Q99788 373 aa18.33■□□□□ 0.52
TRIM47-204ENST00000587339 POLR2J2Q9GZM3 115 aaKnown RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 POLR2J3Q9H1A7 115 aaKnown RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 TUBA8Q9NY65 449 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 TESQ9UGI8 421 aaKnown RBP18.33■□□□□ 0.52
TRIM47-204ENST00000587339 FMO6PO60774 539 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 ALOX12BO75342 701 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 OSMP13725 252 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 MMP11P24347 488 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 CHMP24386 653 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 CRHBPP24387 322 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 EEF1B2P24534 225 aaKnown RBP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 CCKBRP32239 447 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 GGT2P36268 569 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 LSM11P83369 360 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 PLAURQ03405 335 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 FGFBP1Q14512 234 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 PTGES3Q15185 160 aaKnown RBP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 CCDC157Q569K6 752 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 HLA-DQA1Q5Y7H0 255 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 LCN10Q6JVE6 187 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 ZNF730Q6ZMV8 503 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 SLC29A4Q7RTT9 530 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 ZER1Q7Z7L7 766 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 GRAMD2AQ8IUY3 354 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 APLFQ8IW19 511 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 C9orf40Q8IXQ3 194 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 TOR1AIP2Q8NFQ8 470 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 CNOT9Q92600 299 aaKnown RBP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 EDEM2Q9BV94 578 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 SLC26A1Q9H2B4 701 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 AKAP7Q9P0M2 348 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 MRTO4Q9UKD2 239 aaKnown RBP18.32■□□□□ 0.52
TRIM47-204ENST00000587339 BLOC1S6Q9UL45 172 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 SLC7A7Q9UM01 511 aa18.32■□□□□ 0.52
TRIM47-204ENST00000587339 IGHV3-20A0A0C4DH32 117 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 THY1P04216 161 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 KLK3P07288 261 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ZNF28P17035 718 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 HTR2AP28223 471 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 IFNGR2P38484 337 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 HLCSP50747 726 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 CRISP1P54107 249 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 EMP2P54851 167 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 MAD2L1BPQ15013 274 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ZSWIM7Q19AV6 140 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 LAIR2Q6ISS4 152 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 C1orf94Q6P1W5 598 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ANKRD37Q7Z713 158 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 FAM81AQ8TBF8 368 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ACOT11Q8WXI4 607 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 SPSB2Q99619 263 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 RASSF1Q9NS23 344 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 REV1Q9UBZ9 1251 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 TRAPPC13A5PLN9 417 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 OR6C76A6NM76 312 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 IL33O95760 270 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ANGPTL1O95841 491 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 POU1F1P28069 291 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 IDH2P48735 452 aaKnown RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 COX10Q12887 443 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 TOP3AQ13472 1001 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 SATL1Q86VE3 508 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 NKAIN4Q8IVV8 208 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 CMIPQ8IY22 773 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ENTHD1Q8IYW4 607 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 UBE2FQ969M7 185 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 ULBP3Q9BZM4 244 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 WWTR1Q9GZV5 400 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 AKIRIN1Q9H9L7 192 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 DNAJB12Q9NXW2 375 aaKnown RBP18.31■□□□□ 0.52
TRIM47-204ENST00000587339 SLC39A1Q9NY26 324 aa18.31■□□□□ 0.52
TRIM47-204ENST00000587339 H3BN98 237 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 SLC1A7O00341 560 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 CNOT3O75175 753 aaKnown RBP18.3■□□□□ 0.52
TRIM47-204ENST00000587339 SLC5A2P31639 672 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 OR1Q1Q15612 314 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 CD300LDQ6UXZ3 194 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 NLGN4XQ8N0W4 816 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 BPIFB6Q8NFQ5 453 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 CRB3Q9BUF7 120 aa18.3■□□□□ 0.52
TRIM47-204ENST00000587339 NRSN2Q9GZP1 204 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 276.8 ms