RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 TEX10Q9NXF1 929 aaPredicted RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 CALML5Q9NZT1 146 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 P2RX2Q9UBL9 471 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SCOCQ9UIL1 159 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ASB4Q9Y574 426 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 PCDHGB6Q9Y5F9 930 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ORC6Q9Y5N6 252 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SNX8Q9Y5X2 465 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SPG11Q96JI7 2443 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 DUXAA6NLW8 204 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 FAM90A27PA6NNH2 459 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 MYO1GB0I1T2 1018 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ADAMDEC1O15204 470 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 TPST1O60507 370 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 RDH16O75452 317 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 E2F6O75461 281 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SERPINB7O75635 380 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 NEURL1O76050 574 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 PRKD3O94806 890 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ZNF682O95780 498 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 CST1P01037 141 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 RPSAP08865 295 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 SMIM10L1P0DMW3 83 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ABOP16442 354 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ZNF26P17031 533 aaPredicted RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 CDH2P19022 906 aaPredicted RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 CPN2P22792 545 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 XCR1P46094 333 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 CCT3P49368 545 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 RPS6KA3P51812 740 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SMSP52788 366 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 RAB8AP61006 207 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SELENOWP63302 87 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 OLR1P78380 273 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 BTN3A2P78410 334 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 CDK6Q00534 326 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 OC90Q02509 493 aaPredicted RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 FOLH1Q04609 750 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 HSPB3Q12988 150 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 BIKQ13323 160 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SNTB1Q13884 538 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 FAM53BQ14153 422 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 MPEG1Q2M385 716 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SFT2D3Q587I9 215 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.22□□□□□ -1.25
VMP1-204ENST00000587259 REEP3Q6NUK4 255 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 MTFR2Q6P444 385 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 Q6ZPB1 254 aaPredicted RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 PIWIL3Q7Z3Z3 882 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 RNF130Q86XS8 419 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 PTOV1Q86YD1 416 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ZDHHC21Q8IVQ6 265 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 LRRC25Q8N386 305 aaPredicted RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 KCT2Q8NC54 265 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 OR51Q1Q8NH59 317 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 PNPT1Q8TCS8 783 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 MIPOL1Q8TD10 442 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 NUDT8Q8WV74 236 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 GEMIN6Q8WXD5 167 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 TANKQ92844 425 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SMIM10Q96HG1 83 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 AMDHD1Q96NU7 426 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ZNF607Q96SK3 696 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 RBM4BQ9BQ04 359 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 UTP23Q9BRU9 249 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 DOHHQ9BU89 302 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 RBM4Q9BWF3 364 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 BTBD2Q9BX70 525 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 TGIF2Q9GZN2 237 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 RNF32Q9H0A6 362 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 SEMA6AQ9H2E6 1030 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 KLHL31Q9H511 634 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 CDCP1Q9H5V8 836 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 MCCC2Q9HCC0 563 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ZCCHC3Q9NUD5 404 aaKnown RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 SMPD3Q9NY59 655 aaPredicted RBP7.22□□□□□ -1.25
VMP1-204ENST00000587259 ENOPH1Q9UHY7 261 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 ZNF639Q9UID6 485 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 OAZ3Q9UMX2 235 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 DAPP1Q9UN19 280 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 CDC14AQ9UNH5 594 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 LIPT1Q9Y234 373 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 AP4B1Q9Y6B7 739 aa7.22□□□□□ -1.25
VMP1-204ENST00000587259 A0A1W2PR48 441 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 G3V2T6 193 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 H0YAE9 185 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 EMC8O43402 210 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 CDC40O60508 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
VMP1-204ENST00000587259 GALR3O60755 368 aaPredicted RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 ERAL1O75616 437 aaKnown RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 TNFAIP8O95379 198 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 SP1P08047 785 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ETFAP13804 333 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ALDH3A2P51648 485 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ART1P52961 327 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 MVDP53602 400 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 CRISP3P54108 245 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 RAD23AP54725 363 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 LIM2P55344 173 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms