RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 STOML1Q9UBI4 398 aa18■□□□□ 0.47
CLPTM1-204ENST00000585961 DCDC2Q9UHG0 476 aa18■□□□□ 0.47
CLPTM1-204ENST00000585961 EMCNQ9ULC0 261 aa18■□□□□ 0.47
CLPTM1-204ENST00000585961 ZANQ9Y493 2812 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 USF3Q68DE3 2245 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 IGLV3-32A0A0A0MS00 114 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 A0A0J9YW62 118 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 G3V2L1 256 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 SLITRK5O94991 958 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 SYNGR4O95473 234 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 MYL2P10916 166 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 EFNA1P20827 205 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 TSC22D1Q15714 1073 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 MAPK1IP1LQ8NDC0 245 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 NUP43Q8NFH3 380 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 OR6K3Q8NGY3 331 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 TMEM171Q8WVE6 324 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 OSTF1Q92882 214 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 C16orf58Q96GQ5 468 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 GMPPAQ96IJ6 420 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 RNF145Q96MT1 663 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 ACTR6Q9GZN1 396 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 C12orf65Q9H3J6 166 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 RRAGDQ9NQL2 400 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 BAIAP2L1Q9UHR4 511 aa17.99■□□□□ 0.47
CLPTM1-204ENST00000585961 A0A1W2PRB8 838 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 RIPK2O43353 540 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 OXSR1O95747 527 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 FCGR2AP12318 317 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 IL11P20809 199 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 RNF144AP50876 292 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 ATP5J2P56134 94 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 SLC18A2Q05940 514 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 TNK1Q13470 666 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 KIAA0040Q15053 153 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 ZNF385BQ569K4 471 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 CFAP157Q5JU67 520 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 CPTPQ5TA50 214 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 HBMQ6B0K9 141 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 CLEC6AQ6EIG7 209 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 ZYG11AQ6WRX3 759 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 LCA5Q86VQ0 697 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 FAM76AQ8TAV0 307 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 RAB3IL1Q8TBN0 382 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 AKAP1Q92667 903 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 MED17Q9NVC6 651 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 MCTS1Q9ULC4 181 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-204ENST00000585961 SS18L1O75177 396 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 ABHD2P08910 425 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 FAM153BP0C7A2 387 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 ACP2P11117 423 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 MANFP55145 182 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 CARD18P57730 90 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 RAC1P63000 192 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 OCRLQ01968 901 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 SLC29A2Q14542 456 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 FAM153CQ494X1 144 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 GLE1Q53GS7 698 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 CCNJQ5T5M9 372 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 BEND4Q6ZU67 534 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 SLC16A11Q8NCK7 471 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 OR2V1Q8NHB1 315 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 CLHC1Q8NHS4 586 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 IGFBPL1Q8WX77 278 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 CAVIN3Q969G5 261 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 ADGRG7Q96K78 797 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 ADAM21Q9UKJ8 722 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 LAMP3Q9UQV4 416 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 WBP11Q9Y2W2 641 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 FIS1Q9Y3D6 152 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 CCL27Q9Y4X3 112 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 PRR14LQ5THK1 2151 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 TLN2Q9Y4G6 2542 aa17.97■□□□□ 0.47
CLPTM1-204ENST00000585961 HIVEP2P31629 2446 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 ALG1L2C9J202 215 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 HS3ST1O14792 307 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 PDPK1O15530 556 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 RSL1D1O76021 490 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 KCNK2O95069 426 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 NKX2-2O95096 273 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 PPP3CBP16298 524 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 SFTPDP35247 375 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 MAP3K8P41279 467 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 TRMT10CQ7L0Y3 403 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 GTPBP8Q8N3Z3 284 aaPredicted RBP17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 MNS1Q8NEH6 495 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 ATP6V1C2Q8NEY4 427 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 CEP70Q8NHQ1 597 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 POC1BQ8TC44 478 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 ACMSDQ8TDX5 336 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 TSSK3Q96PN8 268 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 CXorf56Q9H5V9 222 aa17.96■□□□□ 0.47
CLPTM1-204ENST00000585961 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.95■□□□□ 0.46
CLPTM1-204ENST00000585961 A0A087WZY1 265 aa17.95■□□□□ 0.46
CLPTM1-204ENST00000585961 ADAMDEC1O15204 470 aa17.95■□□□□ 0.46
CLPTM1-204ENST00000585961 PROCP04070 461 aa17.95■□□□□ 0.46
CLPTM1-204ENST00000585961 HPGDP15428 266 aa17.95■□□□□ 0.46
CLPTM1-204ENST00000585961 PSMA4P25789 261 aaKnown RBP17.95■□□□□ 0.46
CLPTM1-204ENST00000585961 SHC1P29353 583 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms