RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 IGLV3-32A0A0A0MS00 114 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 CLCA1A8K7I4 914 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 RNASET2O00584 256 aaKnown RBP18.48■□□□□ 0.55
SS18-224ENST00000584083 SDHDO14521 159 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 HDAC3O15379 428 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 SNNO75324 88 aaPredicted RBP18.48■□□□□ 0.55
SS18-224ENST00000584083 SOX30O94993 753 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 PEPDP12955 493 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 CTSSP25774 331 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 ZNF136P52737 540 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 CLDN18P56856 261 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 BCL2A1Q16548 175 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 C9orf106Q8NAJ2 232 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 RELL2Q8NC24 303 aaPredicted RBP18.48■□□□□ 0.55
SS18-224ENST00000584083 VPS37AQ8NEZ2 397 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 OR8J2Q8NGG1 315 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 OR4A15Q8NGL6 344 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 RAB3IL1Q8TBN0 382 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 C14orf79Q96F83 325 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 LRRC46Q96FV0 321 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 TM9SF2Q99805 663 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 LRBAP50851 2863 aa18.48■□□□□ 0.55
SS18-224ENST00000584083 GOLGA8QA0A0J9YX86 632 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 OR2M5A3KFT3 312 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 GOLGA8OA6NCC3 632 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 TRPC5OSA6NMA1 111 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 GOLGA8NF8WBI6 632 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 CPSF4O95639 269 aaKnown RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 TMIGD3P0DMS9 266 aaPredicted RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 UQCRC1P31930 480 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 AGFG1P52594 562 aaKnown RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 CLNS1AP54105 237 aaKnown RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 NME5P56597 212 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 TLE4Q04727 773 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 AGBL2Q5U5Z8 902 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 ANXA8L1Q5VT79 327 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 OGFOD2Q6N063 350 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 PLXDC2Q6UX71 529 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 C6orf120Q7Z4R8 191 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 SPATA19Q7Z5L4 167 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 ANKRD46Q86W74 232 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 GRAMD2AQ8IUY3 354 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 WDR75Q8IWA0 830 aaKnown RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 MEIOBQ8N635 442 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 GOT1L1Q8NHS2 421 aaPredicted RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 WNT2BQ93097 391 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 OR7D2Q96RA2 312 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 PIGQQ9BRB3 760 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 WDR55Q9H6Y2 383 aaPredicted RBP18.47■□□□□ 0.55
SS18-224ENST00000584083 ZNF337Q9Y3M9 751 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 KCNE3Q9Y6H6 103 aa18.47■□□□□ 0.55
SS18-224ENST00000584083 RNF103-CHMP3A0A140T963 221 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 PRSS51A0A1B0GVH4 220 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 SLCO1B7G3V0H7 640 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 H3BML4 177 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 LINC01387J3KSC0 135 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 ANKRD28O15084 1053 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 MATN1P21941 496 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 S100A3P33764 101 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 OPRM1P35372 400 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 ASCL1P50553 236 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 DLX5P56178 289 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 RPS26P62854 115 aaKnown RBP18.46■□□□□ 0.55
SS18-224ENST00000584083 MYBPHQ13203 477 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 GLYR1Q49A26 553 aaPredicted RBP18.46■□□□□ 0.55
SS18-224ENST00000584083 DCST2Q5T1A1 773 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 ARSKQ6UWY0 536 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 P4HA3Q7Z4N8 544 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 CLEC4FQ8N1N0 589 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 OR5D16Q8NGK9 328 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 SMPDL3BQ92485 455 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 ARL8AQ96BM9 186 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 TESCQ96BS2 214 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 SH3YL1Q96HL8 342 aaPredicted RBP18.46■□□□□ 0.55
SS18-224ENST00000584083 HOXD1Q9GZZ0 328 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 SLC24A3Q9HC58 644 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 VDAC3Q9Y277 283 aa18.46■□□□□ 0.55
SS18-224ENST00000584083 NPIPA5A0A0B4J1W7 369 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 NPIPA7E9PJI5 369 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 SEC14L5O43304 696 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 ALDOCP09972 364 aaKnown RBP18.45■□□□□ 0.54
SS18-224ENST00000584083 NPIPA8P0DM63 369 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 EPHA3P29320 983 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 EEFSECP57772 596 aaKnown RBP18.45■□□□□ 0.54
SS18-224ENST00000584083 DPY19L1Q2PZI1 675 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 FAM174BQ3ZCQ3 159 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 SPANXN4Q5MJ08 99 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 NXNQ6DKJ4 435 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 POMZP3Q6PJE2 187 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 ADGRE4PQ86SQ3 457 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 MISPQ8IVT2 679 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 ZNF527Q8NB42 609 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 PHOSPHO1Q8TCT1 267 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 INTS12Q96CB8 462 aaKnown RBP18.45■□□□□ 0.54
SS18-224ENST00000584083 SLC35G5Q96KT7 338 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 LURAP1Q96LR2 239 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 ZFP3Q96NJ6 502 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 UCN2Q96RP3 112 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 ZNF559Q9BR84 538 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 AIG1Q9NVV5 245 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms