RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	IGLV3-32	A0A0A0MS00	114 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	TNFSF11	O14788	317 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	NDUFB5	O43674	189 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	SYNGR4	O95473	234 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	PROC	P04070	461 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	FAM153B	P0C7A2	387 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZNF17	P17021	662 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	EFNA1	P20827	205 aa	Predicted RBP	13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	SLC18A2	Q05940	514 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	SLC29A2	Q14542	456 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	FAM153C	Q494X1	144 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	BEX5	Q5H9J7	111 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	PRSS57	Q6UWY2	283 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	PLEKHM3	Q6ZWE6	761 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZAR1	Q86SH2	424 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	PRIMA1	Q86XR5	153 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	WDR75	Q8IWA0	830 aa	Known RBP	13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	GSPT2	Q8IYD1	628 aa	Known RBP	13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	FAM76A	Q8TAV0	307 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	CAVIN3	Q969G5	261 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	PLPPR2	Q96GM1	343 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	RNF145	Q96MT1	663 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	TSSK3	Q96PN8	268 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	KLHDC3	Q9BQ90	382 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	C12orf65	Q9H3J6	166 aa	Known RBP	13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	STOML1	Q9UBI4	398 aa		13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	FN1	P02751	2386 aa	Known RBP	13.56	□□□□□ -0.24
SREBF1-222	ENST00000583732	ARID1A	O14497	2285 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732		A0A1W2PRB8	838 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	INAFM1	C9JVW0	142 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	KLF4	O43474	513 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	SS18L1	O75177	396 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	NKX2-2	O95096	273 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CNOT4	O95628	575 aa	Known RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	UROS	P10746	265 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	RNF144A	P50876	292 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZNF41	P51814	821 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CTU2	Q2VPK5	515 aa	Known RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CCNJ	Q5T5M9	372 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	STAC2	Q6ZMT1	411 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CDRT4	Q8N9R6	151 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	OR4C3	Q8NH37	302 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	OR2V1	Q8NHB1	315 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZFP28	Q8NHY6	868 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	TMEM171	Q8WVE6	324 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	JADE3	Q92613	823 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	PPCDC	Q96CD2	204 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CHMP6	Q96FZ7	201 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	C16orf58	Q96GQ5	468 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	ADGRG7	Q96K78	797 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	GSX2	Q9BZM3	304 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	ACTR6	Q9GZN1	396 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	LRTM1	Q9HBL6	345 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	PLSCR4	Q9NRQ2	329 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	MED17	Q9NVC6	651 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	FBXO34	Q9NWN3	711 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	SH3BP4	Q9P0V3	963 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	WBP11	Q9Y2W2	641 aa	Known RBP	13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	CCL27	Q9Y4X3	112 aa		13.55	□□□□□ -0.24
SREBF1-222	ENST00000583732	ABCA2	Q9BZC7	2435 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732		A0A087WZY1	265 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732		A0A0J9YW62	118 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	SMIM23	A6NLE4	172 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	TTC36	A6NLP5	189 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	ALG1L2	C9J202	215 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	SLC28A1	O00337	649 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	RGS14	O43566	566 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	PLIN3	O60664	434 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	KCNK2	O95069	426 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	NID1	P14543	1247 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	HPGD	P15428	266 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	SDC1	P18827	310 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	SFTPD	P35247	375 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	NR1H2	P55055	460 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	MANF	P55145	182 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	RPL38	P63173	70 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	PPP2R2B	Q00005	443 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	OCRL	Q01968	901 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	KIAA0040	Q15053	153 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	DUSP5	Q16690	384 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	PLPPR5	Q32ZL2	321 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	VPS26B	Q4G0F5	336 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	HBM	Q6B0K9	141 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	IFT20	Q8IY31	132 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	COX18	Q8N8Q8	333 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	SLC16A11	Q8NCK7	471 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	LRRN4CL	Q8ND94	238 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	OR2T11	Q8NH01	316 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	CEP70	Q8NHQ1	597 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	ROBO4	Q8WZ75	1007 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZBTB8A	Q96BR9	441 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	GIMAP5	Q96F15	307 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	MS4A4E	Q96PG1	132 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	RHOXF2	Q9BQY4	288 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	REEP4	Q9H6H4	257 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms