RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 KAT2AQ92830 837 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 EFHD2Q96C19 240 aaPredicted RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 METTL2AQ96IZ6 378 aaKnown RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 KLHL4Q9C0H6 718 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 CXorf56Q9H5V9 222 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 MED4Q9NPJ6 270 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 HAO1Q9UJM8 370 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 CHD3Q12873 2000 aaKnown RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 USF3Q68DE3 2245 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 NPIPB8E9PQR5 432 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 H3BML4 177 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 KLF11O14901 512 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 SCO2O43819 266 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 FADS1O60427 444 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 PLOD3O60568 738 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 CRCPO75575 148 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 SOX30O94993 753 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 PPP3CBP16298 524 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 CLDN20P56880 219 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 ABCE1P61221 599 aaKnown RBP12.18□□□□□ -0.46
SS18-222ENST00000582792 TNK1Q13470 666 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 EXOC3L2Q2M3D2 409 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 ATG16L1Q676U5 607 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 ZNF704Q6ZNC4 412 aaPredicted RBP12.18□□□□□ -0.46
SS18-222ENST00000582792 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 SAMD14Q8IZD0 417 aaPredicted RBP12.18□□□□□ -0.46
SS18-222ENST00000582792 METTL25Q8N6Q8 603 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 OR4N2Q8NGD1 307 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 CCT7Q99832 543 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 TAS2R9Q9NYW1 312 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 MED11Q9P086 117 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 VPS29Q9UBQ0 182 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 OR10H1Q9Y4A9 318 aa12.18□□□□□ -0.46
SS18-222ENST00000582792 WDR91A4D1P6 747 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 AQP8O94778 261 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 CHEK2O96017 543 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 IL3P08700 152 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 NEFHP12036 1026 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 FCGR2AP12318 317 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 BGNP21810 368 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 NR1H2P55055 460 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 ATP5J2P56134 94 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 RPS3AP61247 264 aaKnown RBP12.17□□□□□ -0.46
SS18-222ENST00000582792 PSG6Q00889 435 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 STX3Q13277 289 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 HSP90B2PQ58FF3 399 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 KANK2Q63ZY3 851 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 ZNF611Q8N823 705 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 OR7G2Q8NG99 324 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 OR5M1Q8NGP8 315 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 GFM2Q969S9 779 aaKnown RBP12.17□□□□□ -0.46
SS18-222ENST00000582792 EXOSC8Q96B26 276 aaKnown RBP12.17□□□□□ -0.46
SS18-222ENST00000582792 C1GALT1C1Q96EU7 318 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 HBEGFQ99075 208 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 PAIP2Q9BPZ3 127 aaKnown RBP12.17□□□□□ -0.46
SS18-222ENST00000582792 RTN4RQ9BZR6 473 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 PTGES2Q9H7Z7 377 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 THAP1Q9NVV9 213 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 SIRT5Q9NXA8 310 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 RAP2CQ9Y3L5 183 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 TRAF6Q9Y4K3 522 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 TIMM22Q9Y584 194 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 AP4B1Q9Y6B7 739 aa12.17□□□□□ -0.46
SS18-222ENST00000582792 SLC28A1O00337 649 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 HS3ST1O14792 307 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 SNNO75324 88 aaPredicted RBP12.16□□□□□ -0.46
SS18-222ENST00000582792 PLAUP00749 431 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 CHRNGP07510 517 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 NID1P14543 1247 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 PRPH2P23942 346 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 SLC1A6P48664 564 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 FOXA1P55317 472 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 DMTNQ08495 405 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 STX5Q13190 355 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 UGT3A2Q3SY77 523 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 GLYR1Q49A26 553 aaPredicted RBP12.16□□□□□ -0.46
SS18-222ENST00000582792 CYP27C1Q4G0S4 372 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 FAM219BQ5XKK7 198 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 STAC2Q6ZMT1 411 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 FAM9CQ8IZT9 166 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 OR6K3Q8NGY3 331 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 FAM76AQ8TAV0 307 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 NANOS1Q8WY41 292 aaKnown RBP12.16□□□□□ -0.46
SS18-222ENST00000582792 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 MANSC1Q9H8J5 431 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 TNFRSF12AQ9NP84 129 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 SLC35C2Q9NQQ7 365 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 GIMAP4Q9NUV9 329 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 EMC9Q9Y3B6 208 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 PCNX3Q9H6A9 2034 aa12.16□□□□□ -0.46
SS18-222ENST00000582792 ITM2AO43736 263 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 PCDH7O60245 1069 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms