RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PRDX1	Q06830	199 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MGAT5	Q09328	741 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SLAMF1	Q13291	335 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ITIH4	Q14624	930 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	LARS2	Q15031	903 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ADRM1	Q16186	407 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	HFE	Q30201	348 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GALNTL6	Q49A17	601 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MSS51	Q4VC12	460 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	LRRC38	Q5VT99	294 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CLEC6A	Q6EIG7	209 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	TMEM64	Q6YI46	380 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	USP51	Q70EK9	711 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CPLX4	Q7Z7G2	160 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	C9orf40	Q8IXQ3	194 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SLC22A15	Q8IZD6	547 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	NIPA2	Q8N8Q9	360 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ANKRD42	Q8N9B4	389 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	TMEM35B	Q8NCS4	154 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CCDC197	Q8NCU1	140 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SLC35B2	Q8TB61	432 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SLC2A12	Q8TD20	617 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	WIPF2	Q8TF74	440 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GRK7	Q8WTQ7	553 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CDK15	Q96Q40	435 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	PEBP4	Q96S96	227 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	COPS8	Q99627	209 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CD244	Q9BZW8	370 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MYLK2	Q9H1R3	596 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	FOLH1B	Q9HBA9	442 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MRPL47	Q9HD33	250 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SAYSD1	Q9NPB0	183 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MMP26	Q9NRE1	261 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	INPP5E	Q9NRR6	644 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	PARVA	Q9NVD7	372 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	FGFR1OP2	Q9NVK5	253 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	LEF1	Q9UJU2	399 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SLC12A4	Q9UP95	1085 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SMAD5-AS1	Q9Y6J3	95 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772		A0A1W2PPM1	405 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF814	B7Z6K7	855 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	PRR23D1	E9PI22	279 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	PPIH	O43447	177 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SPAG7	O75391	227 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	FOXH1	O75593	365 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SRP72	O76094	671 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	AP2A2	O94973	939 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	IGHM	P01871	453 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	IGKV3-11	P04433	115 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	HLA-DQB2	P05538	268 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF888	P0CJ79	500 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	KDELR1	P24390	212 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	COL8A2	P25067	703 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	PSMA2	P25787	234 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	RPL22	P35268	128 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	IER3	P46695	156 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC6A8	P48029	635 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	GDF10	P55107	478 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	TPD52	P55327	224 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	GSC	P56915	257 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ERVFRD-1	P60508	538 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	RPS3A	P61247	264 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	NCALD	P61601	193 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	RPS15A	P62244	130 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ELF3	P78545	371 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	LCN2	P80188	198 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	GPS1	Q13098	491 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SNTA1	Q13424	505 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ACAP2	Q15057	778 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	TMED2	Q15363	201 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ZBTB37	Q5TC79	503 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ICE2	Q659A1	982 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	REP15	Q6BDI9	236 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	MFSD12	Q6NUT3	480 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ANGPTL8	Q6UXH0	198 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	BBS12	Q6ZW61	710 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	RAPH1	Q70E73	1250 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SPATA19	Q7Z5L4	167 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	CROCCP2	Q86T23	111 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	ANKMY2	Q8IV38	441 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	IGDCC3	Q8IVU1	814 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	C1orf174	Q8IYL3	243 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	UBQLNL	Q8IYU4	475 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	AGGF1	Q8N302	714 aa	eCLIP	4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	RAB42	Q8N4Z0	105 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC25A41	Q8N5S1	370 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	CCDC89	Q8N998	374 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	WDSUB1	Q8N9V3	476 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	SPERT	Q8NA61	448 aa		4.15	□□□□□ -1.75
MSI2-216	ENST00000582772	OR10S1	Q8NGN2	331 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms