RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PNPT1Q8TCS8 783 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ASB15Q8WXK1 588 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 HAS2Q92819 552 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 MAGED4Q96JG8 741 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 RDH12Q96NR8 316 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ITPAQ9BY32 194 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 SEMA6AQ9H2E6 1030 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 FOLH1BQ9HBA9 442 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 SIRT3Q9NTG7 399 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ZCCHC3Q9NUD5 404 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 LUZP4Q9P127 313 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 V9GYQ6 96 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 AKAP9Q99996 3911 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 FBN2P35556 2912 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 MAGEA13PA6NCF6 341 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 FRG2CA6NGY1 282 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 TMEM200CA6NKL6 621 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 A8MVJ9 347 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 E2F6O75461 281 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 PRKD3O94806 890 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 SOX30O94993 753 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 WDPCPO95876 746 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 HPRP00739 348 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 FABP3P05413 133 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 RPSAP08865 295 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 DRD5P21918 477 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 SOX18P35713 384 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CCT3P49368 545 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CYB561P49447 251 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 HLCSP50747 726 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CDK6Q00534 326 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 OC90Q02509 493 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 DUSP8Q13202 625 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 ZCCHC12Q6PEW1 402 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 AMIGO2Q86SJ2 522 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 RNF130Q86XS8 419 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 KRT73Q86Y46 540 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 PTOV1Q86YD1 416 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 HIPK1Q86Z02 1210 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 ZDHHC13Q8IUH4 622 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF441Q8N8Z8 693 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 NUP43Q8NFH3 380 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 ADIPOR1Q96A54 375 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 HSPBAP1Q96EW2 488 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 LCORQ96JN0 433 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 VSTM2LQ96N03 204 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF570Q96NI8 536 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 RASL10BQ96S79 203 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF607Q96SK3 696 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CXorf36Q9H7Y0 433 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 A4GALTQ9NPC4 353 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 HPF1Q9NWY4 346 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 CALML5Q9NZT1 146 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 P2RX2Q9UBL9 471 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
CSNK1D-220ENST00000581737 OTOGQ6ZRI0 2925 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 TRAV17A0A0B4J275 112 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 DENRO43583 198 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 TNFRSF21O75509 655 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 RASAL1O95294 804 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 KRT20P35900 424 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 NR0B1P51843 470 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 PRKAG1P54619 331 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 TUBA3CQ13748 450 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 RFX4Q33E94 735 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 REEP3Q6NUK4 255 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 TUBA3EQ6PEY2 450 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 CCDC80Q76M96 950 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ZDHHC21Q8IVQ6 265 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 CYP4Z2PQ8N1L4 340 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 GALNT4Q8N4A0 578 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF597Q96LX8 424 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 C5orf34Q96MH7 638 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF347Q96SE7 839 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 CIB1Q99828 191 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 NXF5Q9H1B4 397 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ANKRA2Q9H9E1 313 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 LIN28AQ9H9Z2 209 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ZBTB20Q9HC78 741 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 Q9N2J8 555 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 EQTNQ9NQ60 294 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 LRFN1Q9P244 771 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ERRFI1Q9UJM3 462 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 B3GNT3Q9Y2A9 372 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 GPR55Q9Y2T6 319 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 OR10H1Q9Y4A9 318 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 AP4B1Q9Y6B7 739 aa12.41□□□□□ -0.42
CSNK1D-220ENST00000581737 DUXAA6NLW8 204 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 TO15178 435 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 MAN1A2O60476 641 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 SERPINB7O75635 380 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms