RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 WDR75Q8IWA0 830 aaKnown RBP9.5□□□□□ -0.89
RFFL-209ENST00000581265 GTPBP8Q8N3Z3 284 aaPredicted RBP9.5□□□□□ -0.89
RFFL-209ENST00000581265 OR6K3Q8NGY3 331 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 OR4C3Q8NH37 302 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 CEP70Q8NHQ1 597 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 CDC26Q8NHZ8 85 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 FAM110BQ8TC76 370 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 ACTRT2Q8TDY3 377 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 MZB1Q8WU39 189 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 PERPQ96FX8 193 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 ADGRG7Q96K78 797 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 EGLN2Q96KS0 407 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 C16orf45Q96MC5 204 aaPredicted RBP9.5□□□□□ -0.89
RFFL-209ENST00000581265 PRRG4Q9BZD6 226 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 GLRX2Q9NS18 164 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 NTMQ9P121 344 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 EMCNQ9ULC0 261 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
RFFL-209ENST00000581265 POLR3HQ9Y535 204 aaPredicted RBP9.5□□□□□ -0.89
RFFL-209ENST00000581265 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 TRIM64A6NGJ6 449 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 TRIM64BA6NI03 449 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 SHISA8B8ZZ34 492 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 EIF1AYO14602 144 aaKnown RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 NDUFB5O43674 189 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 TBX19O60806 448 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 SEC22BO75396 215 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 CRLF1O75462 422 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 MYL2P10916 166 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 PRPH2P23942 346 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 PTH2RP49190 550 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 NR1H2P55055 460 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 CTBP2P56545 445 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 DNAJB13P59910 316 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 RAC1P63000 192 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 SLC29A2Q14542 456 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 EXOC3L2Q2M3D2 409 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 CTU2Q2VPK5 515 aaKnown RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 VPS26BQ4G0F5 336 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 CPTPQ5TA50 214 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 PODNL1Q6PEZ8 512 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 FRMD7Q6ZUT3 714 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 CDRT4Q8N9R6 151 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 OR10D3Q8NH80 312 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 GPR151Q8TDV0 419 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 PIK3R3Q92569 461 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 ZBTB8AQ96BR9 441 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 OR10A4Q9H209 315 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 TNFRSF12AQ9NP84 129 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 FANCFQ9NPI8 374 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 ZNF701Q9NV72 531 aaPredicted RBP9.49□□□□□ -0.89
RFFL-209ENST00000581265 VDAC3Q9Y277 283 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 NBEAL1Q6ZS30 2694 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 STAB1Q9NY15 2570 aa9.49□□□□□ -0.89
RFFL-209ENST00000581265 RAI1Q7Z5J4 1906 aaPredicted RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 ATRQ13535 2644 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 A0A1W2PPM1 405 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 GMFGO60234 142 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 CRCPO75575 148 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 OXSR1O95747 527 aaPredicted RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 PLGP00747 810 aaPredicted RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 PROCP04070 461 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 UROSP10746 265 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 PSMB1P20618 241 aaKnown RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 LCN1P31025 176 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 FRKP42685 505 aaPredicted RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 GTF2IRD2BQ6EKJ0 949 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 ZCCHC12Q6PEW1 402 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 ZNF704Q6ZNC4 412 aaPredicted RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 Q6ZSR9 355 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 BEND4Q6ZU67 534 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 ESPNLQ6ZVH7 1005 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 GTF2IRD2Q86UP8 949 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 IFT20Q8IY31 132 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 ZNF611Q8N823 705 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 SLC16A11Q8NCK7 471 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 OR6Y1Q8NGX8 325 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 SLC9A6Q92581 669 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 GIMAP5Q96F15 307 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 TMEM204Q9BSN7 226 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 TXLNGYQ9BZA5 131 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 REEP4Q9H6H4 257 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 EQTNQ9NQ60 294 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 UBQLN4Q9NRR5 601 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 OXSMQ9NWU1 459 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 PSMC3IPQ9P2W1 217 aaPredicted RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 TBK1Q9UHD2 729 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 MCTS1Q9ULC4 181 aaKnown RBP9.48□□□□□ -0.89
RFFL-209ENST00000581265 CLEC4AQ9UMR7 237 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 GPR52Q9Y2T5 361 aa9.48□□□□□ -0.89
RFFL-209ENST00000581265 A0A0J9YW62 118 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 A0A1W2PRB8 838 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 SLC28A1O00337 649 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 PDPK1O15530 556 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CXCL13O43927 109 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms