RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 AP1ARQ63HQ0 302 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 FAM214BQ7L5A3 538 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 MARCH3Q86UD3 253 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GGNQ86UU5 652 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GSPT2Q8IYD1 628 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 LRRC34Q8IZ02 419 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GCNT2Q8N0V5 402 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 C4orf33Q8N1A6 199 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 LINC01560Q8TB33 94 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 TWIST2Q8WVJ9 160 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 NRGNQ92686 78 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 COQ8BQ96D53 544 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 PRPF18Q99633 342 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 BTBD2Q9BX70 525 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 HOXD1Q9GZZ0 328 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 PIGUQ9H490 435 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 FANCFQ9NPI8 374 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 DLL4Q9NR61 685 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ASIC5Q9NY37 505 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF226Q9NYT6 803 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 RPH3AQ9Y2J0 694 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ACTL7BQ9Y614 415 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 DSCAMO60469 2012 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 SCAMP2O15127 329 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 CTIFO43310 598 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 IGKV1D-16P01601 117 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 ALOX5P09917 674 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 LINC00032P0C843 101 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 KLK2P20151 261 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 PRPS1L1P21108 318 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 ELK4P28324 431 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 SUMO3P55854 103 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 MAD2L1Q13257 205 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 LSM12Q3MHD2 195 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 CPTPQ5TA50 214 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 ESPNLQ6ZVH7 1005 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 LUZP2Q86TE4 346 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 WDR75Q8IWA0 830 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 LRRC75A-AS1Q8N1F1 130 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 SLC16A11Q8NCK7 471 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 OR4C3Q8NH37 302 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 OR5P2Q8WZ92 322 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 CIDECQ96AQ7 238 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 GMPPAQ96IJ6 420 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 ADGRG7Q96K78 797 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 TSSK3Q96PN8 268 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 LIME1Q9H400 295 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 ANKZF1Q9H8Y5 726 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 FLRT3Q9NZU0 649 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 EIF3LQ9Y262 564 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 HEATR5AQ86XA9 2040 aa13.04□□□□□ -0.32
SMARCE1-213ENST00000578044 GXYLT2A0PJZ3 443 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 C16orf97H3BN30 126 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 CHRNGP07510 517 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 GUSBP08236 651 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 ACP2P11117 423 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 CRYGSP22914 178 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 HOXC12P31275 282 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 UGT2B10P36537 528 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 CLDN20P56880 219 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 KEAP1Q14145 624 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 DUSP5Q16690 384 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 C6orf136Q5SQH8 315 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 SHEQ5VZ18 495 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 GTF2IRD2BQ6EKJ0 949 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 CDC73Q6P1J9 531 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 BHLHB9Q6PI77 547 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF474Q6S9Z5 364 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 BTLAQ7Z6A9 289 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 GTF2IRD2Q86UP8 949 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 RIMKLAQ8IXN7 391 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 MREGQ8N565 214 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF527Q8NB42 609 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 OR56A1Q8NGH5 318 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 OR6K3Q8NGY3 331 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 FIG4Q92562 907 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 FAM120BQ96EK7 910 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 PGM2Q96G03 612 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF845Q96IR2 970 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 FAM111AQ96PZ2 611 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 PINK1Q9BXM7 581 aa13.03□□□□□ -0.32
SMARCE1-213ENST00000578044 BHLHE41Q9C0J9 482 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms