RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 FAM114A2Q9NRY5 505 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 RBM28Q9NW13 759 aaKnown RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 UTP6Q9NYH9 597 aaKnown RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 TAS2R3Q9NYW6 316 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ERVK-18Q9QC07 812 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ISY1Q9ULR0 285 aaKnown RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 BARX2Q9UMQ3 279 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 PPIAL4AQ9Y536 164 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 SLCO1B1Q9Y6L6 691 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CUX2O14529 1486 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 NCAPD2Q15021 1401 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 RNF103-CHMP3A0A140T963 221 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 LRIT2A6NDA9 550 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ARHGAP42A6NI28 874 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 F8WDY8 70 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 K7ENP7 123 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 PDXKO00764 312 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 CABYRO75952 493 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TIMP1P01033 207 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 HIST1H2AGP0C0S8 130 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF18P17022 549 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 SDC1P18827 310 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 PAICSP22234 425 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 HNRNPA2B1P22626 353 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 CYP2F1P24903 491 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TMOD1P28289 359 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 HPDP32754 393 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ADRA1AP35348 466 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 CYLC1P35663 651 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 RPL32P62910 135 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 MYBPC1Q00872 1141 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF45Q02386 682 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 PUDPQ08623 228 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 KLHL30Q0D2K2 578 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 DAZ2Q13117 558 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 IL18R1Q13478 541 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ELAVL3Q14576 367 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 HERPUD1Q15011 391 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 CDKN3Q16667 212 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ACSF3Q4G176 576 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TOR1AIP1Q5JTV8 583 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 C12orf60Q5U649 245 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 MEDAGQ5VYS4 303 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 RAET1GQ6H3X3 334 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 SULT1C3Q6IMI6 304 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 LEG1Q6P5S2 330 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF562Q6V9R5 426 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 DPY19L2P2Q6ZN68 376 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TIFABQ6ZNK6 161 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TSEN54Q7Z6J9 526 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 C17orf82Q86X59 251 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 LINC01561Q8N1V8 128 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 BCORP1Q8N888 145 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 FAM71CQ8NEG0 241 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 WDR36Q8NI36 951 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ARNTL2Q8WYA1 636 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ART4Q93070 314 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 HIST1H2ACQ93077 130 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 SLC25A36Q96CQ1 311 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 DTNBP1Q96EV8 351 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 DNAJA3Q96EY1 480 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 SMIM14Q96QK8 99 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TMEM121Q9BTD3 319 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 RAB17Q9H0T7 212 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 TMEM231Q9H6L2 316 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ECT2Q9H8V3 914 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF331Q9NQX6 463 aaPredicted RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 DAZ3Q9NR90 486 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 CGNQ9P2M7 1197 aaKnown RBP1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ATXN10Q9UBB4 475 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 ONECUT1Q9UBC0 465 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 FOXJ3Q9UPW0 622 aa1.43□□□□□ -2.18
TOP2A-202ENST00000577541 FBLL1A6NHQ2 334 aaKnown RBP1.42□□□□□ -2.18
TOP2A-202ENST00000577541 ZSCAN5BA6NJL1 495 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 RASGRF2O14827 1237 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 TM9SF1O15321 606 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 NOL4O94818 638 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 OR4F21O95013 312 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 TRIM16O95361 564 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 GUCA1CO95843 209 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 IGSF6O95976 241 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 AK1P00568 194 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 IGHDP01880 384 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 CCDC192P0DO97 292 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 PTPN6P29350 595 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 ACVR1BP36896 505 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 DLSTP36957 453 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 PTGFRP43088 359 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 HTR5AP47898 357 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 LINC00315P59091 139 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 MRPS6P82932 125 aaKnown RBP1.42□□□□□ -2.18
TOP2A-202ENST00000577541 IL9RQ01113 521 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 ZP4Q12836 540 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 BNIP1Q12981 228 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 DPYSQ14117 519 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 TFDP1Q14186 410 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 DPYSL3Q14195 570 aa1.42□□□□□ -2.18
TOP2A-202ENST00000577541 EIF2B1Q14232 305 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms